Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhga6Q91XY2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga6Q91XY2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga6Q91XY2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhga6Q91XY2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga6Q91XY2 Gm3375-201ENSMUST00000203929 796 ntBASIC17.69■□□□□ 0.42
Pcdhga6Q91XY2 Gm18959-201ENSMUST00000208954 655 ntBASIC17.69■□□□□ 0.42
Pcdhga6Q91XY2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga6Q91XY2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga6Q91XY2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga6Q91XY2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga6Q91XY2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga6Q91XY2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhga6Q91XY2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga6Q91XY2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga6Q91XY2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga6Q91XY2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhga6Q91XY2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga6Q91XY2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga6Q91XY2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.68■□□□□ 0.42
Pcdhga6Q91XY2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga6Q91XY2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga6Q91XY2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.68■□□□□ 0.42
Pcdhga6Q91XY2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhga6Q91XY2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhga6Q91XY2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga6Q91XY2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.68■□□□□ 0.42
Pcdhga6Q91XY2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga6Q91XY2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga6Q91XY2 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.68■□□□□ 0.42
Pcdhga6Q91XY2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhga6Q91XY2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhga6Q91XY2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga6Q91XY2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga6Q91XY2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga6Q91XY2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga6Q91XY2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga6Q91XY2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga6Q91XY2 Gm14859-201ENSMUST00000117752 357 ntBASIC17.67■□□□□ 0.42
Pcdhga6Q91XY2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga6Q91XY2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.67■□□□□ 0.42
Pcdhga6Q91XY2 Gm18025-201ENSMUST00000221733 862 ntBASIC17.67■□□□□ 0.42
Pcdhga6Q91XY2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga6Q91XY2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga6Q91XY2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhga6Q91XY2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga6Q91XY2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga6Q91XY2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga6Q91XY2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhga6Q91XY2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga6Q91XY2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga6Q91XY2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga6Q91XY2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga6Q91XY2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga6Q91XY2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhga6Q91XY2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga6Q91XY2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga6Q91XY2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdhga6Q91XY2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga6Q91XY2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga6Q91XY2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga6Q91XY2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga6Q91XY2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhga6Q91XY2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga6Q91XY2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga6Q91XY2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga6Q91XY2 Gm9103-201ENSMUST00000119371 405 ntBASIC17.65■□□□□ 0.42
Pcdhga6Q91XY2 Gm12382-201ENSMUST00000122005 922 ntBASIC17.65■□□□□ 0.42
Pcdhga6Q91XY2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.65■□□□□ 0.42
Pcdhga6Q91XY2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga6Q91XY2 Gm6345-202ENSMUST00000180900 204 ntBASIC17.65■□□□□ 0.42
Pcdhga6Q91XY2 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.65■□□□□ 0.42
Pcdhga6Q91XY2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga6Q91XY2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga6Q91XY2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga6Q91XY2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga6Q91XY2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga6Q91XY2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga6Q91XY2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhga6Q91XY2 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.64■□□□□ 0.41
Pcdhga6Q91XY2 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.64■□□□□ 0.41
Pcdhga6Q91XY2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga6Q91XY2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga6Q91XY2 Gm15375-201ENSMUST00000119510 849 ntBASIC17.64■□□□□ 0.41
Pcdhga6Q91XY2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhga6Q91XY2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga6Q91XY2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhga6Q91XY2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga6Q91XY2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga6Q91XY2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga6Q91XY2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdhga6Q91XY2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhga6Q91XY2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga6Q91XY2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga6Q91XY2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga6Q91XY2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhga6Q91XY2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.63■□□□□ 0.41
Pcdhga6Q91XY2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.63■□□□□ 0.41
Pcdhga6Q91XY2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga6Q91XY2 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms