Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga9Q91XX9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhga9Q91XX9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga9Q91XX9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga9Q91XX9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga9Q91XX9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga9Q91XX9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga9Q91XX9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga9Q91XX9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga9Q91XX9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.63■□□□□ 0.41
Pcdhga9Q91XX9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga9Q91XX9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdhga9Q91XX9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga9Q91XX9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga9Q91XX9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga9Q91XX9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga9Q91XX9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga9Q91XX9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga9Q91XX9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga9Q91XX9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga9Q91XX9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga9Q91XX9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga9Q91XX9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdhga9Q91XX9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga9Q91XX9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhga9Q91XX9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga9Q91XX9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Mir7071-201ENSMUST00000184847 69 ntBASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga9Q91XX9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhga9Q91XX9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga9Q91XX9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhga9Q91XX9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga9Q91XX9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Pcdhga9Q91XX9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhga9Q91XX9 Mir6982-201ENSMUST00000184354 68 ntBASIC17.6■□□□□ 0.41
Pcdhga9Q91XX9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhga9Q91XX9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga9Q91XX9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhga9Q91XX9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga9Q91XX9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga9Q91XX9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga9Q91XX9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga9Q91XX9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga9Q91XX9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga9Q91XX9 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.59■□□□□ 0.41
Pcdhga9Q91XX9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga9Q91XX9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga9Q91XX9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga9Q91XX9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.59■□□□□ 0.41
Pcdhga9Q91XX9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.59■□□□□ 0.41
Pcdhga9Q91XX9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga9Q91XX9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga9Q91XX9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdhga9Q91XX9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga9Q91XX9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga9Q91XX9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga9Q91XX9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga9Q91XX9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga9Q91XX9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga9Q91XX9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga9Q91XX9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhga9Q91XX9 Grk6-206ENSMUST00000224995 2971 ntBASIC17.58■□□□□ 0.41
Pcdhga9Q91XX9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhga9Q91XX9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhga9Q91XX9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhga9Q91XX9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhga9Q91XX9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhga9Q91XX9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhga9Q91XX9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhga9Q91XX9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhga9Q91XX9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhga9Q91XX9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhga9Q91XX9 Gm11249-201ENSMUST00000117071 859 ntBASIC17.58■□□□□ 0.4
Pcdhga9Q91XX9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga9Q91XX9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.58■□□□□ 0.4
Pcdhga9Q91XX9 Gm18666-201ENSMUST00000190039 958 ntBASIC17.58■□□□□ 0.4
Pcdhga9Q91XX9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.58■□□□□ 0.4
Pcdhga9Q91XX9 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms