Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb1Q91XX8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb1Q91XX8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb1Q91XX8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb1Q91XX8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb1Q91XX8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb1Q91XX8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb1Q91XX8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhgb1Q91XX8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb1Q91XX8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb1Q91XX8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.48■□□□□ 0.55
Pcdhgb1Q91XX8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.48■□□□□ 0.55
Pcdhgb1Q91XX8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb1Q91XX8 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.48■□□□□ 0.55
Pcdhgb1Q91XX8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Pcdhgb1Q91XX8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb1Q91XX8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb1Q91XX8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhgb1Q91XX8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb1Q91XX8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhgb1Q91XX8 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.48■□□□□ 0.55
Pcdhgb1Q91XX8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb1Q91XX8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb1Q91XX8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb1Q91XX8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb1Q91XX8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb1Q91XX8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb1Q91XX8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb1Q91XX8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb1Q91XX8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdhgb1Q91XX8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdhgb1Q91XX8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb1Q91XX8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Pcdhgb1Q91XX8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb1Q91XX8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb1Q91XX8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb1Q91XX8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.46■□□□□ 0.55
Pcdhgb1Q91XX8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb1Q91XX8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb1Q91XX8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhgb1Q91XX8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Pcdhgb1Q91XX8 Mir6349-201ENSMUST00000184059 97 ntBASIC18.46■□□□□ 0.55
Pcdhgb1Q91XX8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb1Q91XX8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhgb1Q91XX8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb1Q91XX8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb1Q91XX8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdhgb1Q91XX8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhgb1Q91XX8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb1Q91XX8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb1Q91XX8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb1Q91XX8 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.45■□□□□ 0.54
Pcdhgb1Q91XX8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb1Q91XX8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb1Q91XX8 Gm12382-201ENSMUST00000122005 922 ntBASIC18.45■□□□□ 0.54
Pcdhgb1Q91XX8 Gm5417-201ENSMUST00000079706 384 ntBASIC18.45■□□□□ 0.54
Pcdhgb1Q91XX8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb1Q91XX8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb1Q91XX8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhgb1Q91XX8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb1Q91XX8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb1Q91XX8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb1Q91XX8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb1Q91XX8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb1Q91XX8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb1Q91XX8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb1Q91XX8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pcdhgb1Q91XX8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhgb1Q91XX8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb1Q91XX8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb1Q91XX8 Mir2861-201ENSMUST00000175539 82 ntBASIC18.44■□□□□ 0.54
Pcdhgb1Q91XX8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.44■□□□□ 0.54
Pcdhgb1Q91XX8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Pcdhgb1Q91XX8 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms