Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgc3Q91XX1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdhgc3Q91XX1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgc3Q91XX1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgc3Q91XX1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgc3Q91XX1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhgc3Q91XX1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc3Q91XX1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdhgc3Q91XX1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.83■□□□□ 0.28
Pcdhgc3Q91XX1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc3Q91XX1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhgc3Q91XX1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhgc3Q91XX1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc3Q91XX1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc3Q91XX1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhgc3Q91XX1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc3Q91XX1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc3Q91XX1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc3Q91XX1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc3Q91XX1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc3Q91XX1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc3Q91XX1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhgc3Q91XX1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc3Q91XX1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgc3Q91XX1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc3Q91XX1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhgc3Q91XX1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc3Q91XX1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc3Q91XX1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc3Q91XX1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc3Q91XX1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc3Q91XX1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc3Q91XX1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc3Q91XX1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.82■□□□□ 0.28
Pcdhgc3Q91XX1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Pcdhgc3Q91XX1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc3Q91XX1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc3Q91XX1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc3Q91XX1 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.82■□□□□ 0.28
Pcdhgc3Q91XX1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc3Q91XX1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc3Q91XX1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhgc3Q91XX1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhgc3Q91XX1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgc3Q91XX1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.81■□□□□ 0.28
Pcdhgc3Q91XX1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc3Q91XX1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc3Q91XX1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc3Q91XX1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc3Q91XX1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc3Q91XX1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc3Q91XX1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.81■□□□□ 0.28
Pcdhgc3Q91XX1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc3Q91XX1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc3Q91XX1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc3Q91XX1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhgc3Q91XX1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc3Q91XX1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc3Q91XX1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc3Q91XX1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc3Q91XX1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.81■□□□□ 0.28
Pcdhgc3Q91XX1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgc3Q91XX1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhgc3Q91XX1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc3Q91XX1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc3Q91XX1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc3Q91XX1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc3Q91XX1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc3Q91XX1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc3Q91XX1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc3Q91XX1 Gm6139-201ENSMUST00000079261 882 ntBASIC16.8■□□□□ 0.28
Pcdhgc3Q91XX1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc3Q91XX1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc3Q91XX1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhgc3Q91XX1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc3Q91XX1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc3Q91XX1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc3Q91XX1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Pcdhgc3Q91XX1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc3Q91XX1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc3Q91XX1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc3Q91XX1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc3Q91XX1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc3Q91XX1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc3Q91XX1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc3Q91XX1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhgc3Q91XX1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc3Q91XX1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc3Q91XX1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc3Q91XX1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc3Q91XX1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc3Q91XX1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhgc3Q91XX1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhgc3Q91XX1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc3Q91XX1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc3Q91XX1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc3Q91XX1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc3Q91XX1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhgc3Q91XX1 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.79■□□□□ 0.28
Pcdhgc3Q91XX1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms