Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3d19Q91X43 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3d19Q91X43 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Sh3d19Q91X43 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3d19Q91X43 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3d19Q91X43 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.56■□□□□ 0.56
Sh3d19Q91X43 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3d19Q91X43 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3d19Q91X43 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3d19Q91X43 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.56■□□□□ 0.56
Sh3d19Q91X43 Gm10418-201ENSMUST00000100943 576 ntBASIC18.56■□□□□ 0.56
Sh3d19Q91X43 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3d19Q91X43 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.56■□□□□ 0.56
Sh3d19Q91X43 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Sh3d19Q91X43 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3d19Q91X43 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.56■□□□□ 0.56
Sh3d19Q91X43 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3d19Q91X43 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.56■□□□□ 0.56
Sh3d19Q91X43 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3d19Q91X43 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3d19Q91X43 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3d19Q91X43 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3d19Q91X43 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3d19Q91X43 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.55■□□□□ 0.56
Sh3d19Q91X43 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3d19Q91X43 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3d19Q91X43 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Sh3d19Q91X43 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Sh3d19Q91X43 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3d19Q91X43 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Timm23-208ENSMUST00000226683 750 ntBASIC18.54■□□□□ 0.56
Sh3d19Q91X43 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3d19Q91X43 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3d19Q91X43 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3d19Q91X43 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3d19Q91X43 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Sh3d19Q91X43 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3d19Q91X43 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Sh3d19Q91X43 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3d19Q91X43 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3d19Q91X43 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3d19Q91X43 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3d19Q91X43 Gm13401-201ENSMUST00000117074 291 ntBASIC18.53■□□□□ 0.56
Sh3d19Q91X43 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.53■□□□□ 0.56
Sh3d19Q91X43 Gm10517-202ENSMUST00000192970 758 ntBASIC18.53■□□□□ 0.56
Sh3d19Q91X43 Gm3375-201ENSMUST00000203929 796 ntBASIC18.53■□□□□ 0.56
Sh3d19Q91X43 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3d19Q91X43 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3d19Q91X43 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.53■□□□□ 0.56
Sh3d19Q91X43 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3d19Q91X43 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3d19Q91X43 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3d19Q91X43 Fst-202ENSMUST00000223640 2612 ntBASIC18.53■□□□□ 0.56
Sh3d19Q91X43 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.52■□□□□ 0.56
Sh3d19Q91X43 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3d19Q91X43 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.52■□□□□ 0.56
Sh3d19Q91X43 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Sh3d19Q91X43 Gm15565-201ENSMUST00000118890 427 ntBASIC18.52■□□□□ 0.56
Sh3d19Q91X43 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Sh3d19Q91X43 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.52■□□□□ 0.56
Sh3d19Q91X43 Gm29791-202ENSMUST00000207888 369 ntBASIC18.52■□□□□ 0.56
Sh3d19Q91X43 Gm5417-201ENSMUST00000079706 384 ntBASIC18.52■□□□□ 0.56
Sh3d19Q91X43 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3d19Q91X43 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.52■□□□□ 0.56
Sh3d19Q91X43 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3d19Q91X43 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3d19Q91X43 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3d19Q91X43 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3d19Q91X43 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3d19Q91X43 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3d19Q91X43 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3d19Q91X43 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3d19Q91X43 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3d19Q91X43 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms