Protein–RNA interactions for Protein: Q91VH2

Snx9, Sorting nexin-9, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx9Q91VH2 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.7■□□□□ 0.58
Snx9Q91VH2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx9Q91VH2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx9Q91VH2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx9Q91VH2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Snx9Q91VH2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx9Q91VH2 Gm6576-201ENSMUST00000169678 883 ntBASIC18.7■□□□□ 0.58
Snx9Q91VH2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.7■□□□□ 0.58
Snx9Q91VH2 Gm10252-201ENSMUST00000209541 832 ntBASIC18.7■□□□□ 0.58
Snx9Q91VH2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx9Q91VH2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx9Q91VH2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx9Q91VH2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Snx9Q91VH2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx9Q91VH2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx9Q91VH2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx9Q91VH2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx9Q91VH2 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.7■□□□□ 0.58
Snx9Q91VH2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.7■□□□□ 0.58
Snx9Q91VH2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx9Q91VH2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Snx9Q91VH2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Snx9Q91VH2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Snx9Q91VH2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.69■□□□□ 0.58
Snx9Q91VH2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.69■□□□□ 0.58
Snx9Q91VH2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.69■□□□□ 0.58
Snx9Q91VH2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.69■□□□□ 0.58
Snx9Q91VH2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Snx9Q91VH2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx9Q91VH2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.69■□□□□ 0.58
Snx9Q91VH2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Snx9Q91VH2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Snx9Q91VH2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Snx9Q91VH2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Snx9Q91VH2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx9Q91VH2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Snx9Q91VH2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx9Q91VH2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Snx9Q91VH2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Snx9Q91VH2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Snx9Q91VH2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx9Q91VH2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx9Q91VH2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx9Q91VH2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx9Q91VH2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx9Q91VH2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx9Q91VH2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Snx9Q91VH2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Snx9Q91VH2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Snx9Q91VH2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx9Q91VH2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Snx9Q91VH2 Mir1199-201ENSMUST00000117015 119 ntBASIC18.67■□□□□ 0.58
Snx9Q91VH2 Gm37292-201ENSMUST00000192062 758 ntBASIC18.67■□□□□ 0.58
Snx9Q91VH2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Snx9Q91VH2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Snx9Q91VH2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx9Q91VH2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx9Q91VH2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx9Q91VH2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx9Q91VH2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Snx9Q91VH2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Snx9Q91VH2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx9Q91VH2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx9Q91VH2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx9Q91VH2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx9Q91VH2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Snx9Q91VH2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx9Q91VH2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx9Q91VH2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx9Q91VH2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx9Q91VH2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx9Q91VH2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Snx9Q91VH2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.66■□□□□ 0.58
Snx9Q91VH2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Snx9Q91VH2 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.66■□□□□ 0.58
Snx9Q91VH2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx9Q91VH2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.66■□□□□ 0.58
Snx9Q91VH2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx9Q91VH2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx9Q91VH2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx9Q91VH2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.65■□□□□ 0.58
Snx9Q91VH2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx9Q91VH2 Gm12382-201ENSMUST00000122005 922 ntBASIC18.65■□□□□ 0.58
Snx9Q91VH2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snx9Q91VH2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx9Q91VH2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Snx9Q91VH2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx9Q91VH2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx9Q91VH2 Rarb-207ENSMUST00000225921 2756 ntBASIC18.65■□□□□ 0.58
Snx9Q91VH2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Snx9Q91VH2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx9Q91VH2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snx9Q91VH2 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.65■□□□□ 0.58
Snx9Q91VH2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx9Q91VH2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx9Q91VH2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx9Q91VH2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx9Q91VH2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx9Q91VH2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Snx9Q91VH2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms