Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TraipQ8VIG6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.96■□□□□ 0.63
TraipQ8VIG6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TraipQ8VIG6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.96■□□□□ 0.63
TraipQ8VIG6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.96■□□□□ 0.63
TraipQ8VIG6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.96■□□□□ 0.63
TraipQ8VIG6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TraipQ8VIG6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TraipQ8VIG6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TraipQ8VIG6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TraipQ8VIG6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TraipQ8VIG6 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.96■□□□□ 0.63
TraipQ8VIG6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TraipQ8VIG6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
TraipQ8VIG6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TraipQ8VIG6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TraipQ8VIG6 Gm13401-201ENSMUST00000117074 291 ntBASIC18.95■□□□□ 0.62
TraipQ8VIG6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TraipQ8VIG6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.95■□□□□ 0.62
TraipQ8VIG6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.95■□□□□ 0.62
TraipQ8VIG6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TraipQ8VIG6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TraipQ8VIG6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.95■□□□□ 0.62
TraipQ8VIG6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TraipQ8VIG6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TraipQ8VIG6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TraipQ8VIG6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TraipQ8VIG6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.94■□□□□ 0.62
TraipQ8VIG6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TraipQ8VIG6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TraipQ8VIG6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TraipQ8VIG6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TraipQ8VIG6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TraipQ8VIG6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TraipQ8VIG6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TraipQ8VIG6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TraipQ8VIG6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TraipQ8VIG6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TraipQ8VIG6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TraipQ8VIG6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TraipQ8VIG6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TraipQ8VIG6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TraipQ8VIG6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.93■□□□□ 0.62
TraipQ8VIG6 Gm12085-201ENSMUST00000119263 940 ntBASIC18.93■□□□□ 0.62
TraipQ8VIG6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TraipQ8VIG6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TraipQ8VIG6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TraipQ8VIG6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TraipQ8VIG6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TraipQ8VIG6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TraipQ8VIG6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TraipQ8VIG6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TraipQ8VIG6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TraipQ8VIG6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TraipQ8VIG6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TraipQ8VIG6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TraipQ8VIG6 Gm24841-201ENSMUST00000158676 357 ntBASIC18.92■□□□□ 0.62
TraipQ8VIG6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.92■□□□□ 0.62
TraipQ8VIG6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TraipQ8VIG6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TraipQ8VIG6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TraipQ8VIG6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TraipQ8VIG6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TraipQ8VIG6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TraipQ8VIG6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TraipQ8VIG6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.91■□□□□ 0.62
TraipQ8VIG6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TraipQ8VIG6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TraipQ8VIG6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.91■□□□□ 0.62
TraipQ8VIG6 Gm7889-201ENSMUST00000185591 958 ntBASIC18.91■□□□□ 0.62
TraipQ8VIG6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TraipQ8VIG6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.91■□□□□ 0.62
TraipQ8VIG6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TraipQ8VIG6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TraipQ8VIG6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TraipQ8VIG6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.91■□□□□ 0.62
TraipQ8VIG6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TraipQ8VIG6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TraipQ8VIG6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TraipQ8VIG6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TraipQ8VIG6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TraipQ8VIG6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.9■□□□□ 0.62
TraipQ8VIG6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TraipQ8VIG6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TraipQ8VIG6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TraipQ8VIG6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TraipQ8VIG6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TraipQ8VIG6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TraipQ8VIG6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TraipQ8VIG6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TraipQ8VIG6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TraipQ8VIG6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TraipQ8VIG6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TraipQ8VIG6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TraipQ8VIG6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
TraipQ8VIG6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TraipQ8VIG6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.89■□□□□ 0.61
TraipQ8VIG6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TraipQ8VIG6 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.89■□□□□ 0.61
TraipQ8VIG6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms