Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim60Q8VI40 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim60Q8VI40 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim60Q8VI40 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim60Q8VI40 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trim60Q8VI40 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim60Q8VI40 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.43■□□□□ 0.54
Trim60Q8VI40 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
Trim60Q8VI40 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.43■□□□□ 0.54
Trim60Q8VI40 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trim60Q8VI40 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim60Q8VI40 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim60Q8VI40 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim60Q8VI40 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim60Q8VI40 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim60Q8VI40 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim60Q8VI40 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim60Q8VI40 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim60Q8VI40 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim60Q8VI40 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim60Q8VI40 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim60Q8VI40 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim60Q8VI40 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim60Q8VI40 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim60Q8VI40 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim60Q8VI40 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim60Q8VI40 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim60Q8VI40 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.42■□□□□ 0.54
Trim60Q8VI40 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim60Q8VI40 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Trim60Q8VI40 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim60Q8VI40 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim60Q8VI40 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim60Q8VI40 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim60Q8VI40 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim60Q8VI40 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim60Q8VI40 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim60Q8VI40 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim60Q8VI40 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim60Q8VI40 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim60Q8VI40 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim60Q8VI40 Gm10033-202ENSMUST00000211874 928 ntBASIC18.41■□□□□ 0.54
Trim60Q8VI40 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim60Q8VI40 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim60Q8VI40 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim60Q8VI40 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim60Q8VI40 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim60Q8VI40 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim60Q8VI40 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim60Q8VI40 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim60Q8VI40 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim60Q8VI40 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trim60Q8VI40 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.4■□□□□ 0.54
Trim60Q8VI40 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim60Q8VI40 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim60Q8VI40 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim60Q8VI40 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trim60Q8VI40 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.4■□□□□ 0.54
Trim60Q8VI40 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim60Q8VI40 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim60Q8VI40 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim60Q8VI40 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim60Q8VI40 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim60Q8VI40 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim60Q8VI40 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim60Q8VI40 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim60Q8VI40 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim60Q8VI40 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim60Q8VI40 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim60Q8VI40 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.4■□□□□ 0.54
Trim60Q8VI40 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trim60Q8VI40 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trim60Q8VI40 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Trim60Q8VI40 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim60Q8VI40 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim60Q8VI40 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim60Q8VI40 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.39■□□□□ 0.54
Trim60Q8VI40 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim60Q8VI40 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim60Q8VI40 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
Trim60Q8VI40 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim60Q8VI40 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
Trim60Q8VI40 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim60Q8VI40 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim60Q8VI40 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim60Q8VI40 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trim60Q8VI40 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.39■□□□□ 0.53
Trim60Q8VI40 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim60Q8VI40 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim60Q8VI40 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim60Q8VI40 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.39■□□□□ 0.53
Trim60Q8VI40 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.39■□□□□ 0.53
Trim60Q8VI40 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim60Q8VI40 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim60Q8VI40 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim60Q8VI40 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim60Q8VI40 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim60Q8VI40 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trim60Q8VI40 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim60Q8VI40 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms