Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Gm28659-201ENSMUST00000188013 759 ntBASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cspg4Q8VHY0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cspg4Q8VHY0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cspg4Q8VHY0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cspg4Q8VHY0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cspg4Q8VHY0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cspg4Q8VHY0 Gm13474-201ENSMUST00000122466 815 ntBASIC15.31■□□□□ 0.04
Cspg4Q8VHY0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cspg4Q8VHY0 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.31■□□□□ 0.04
Cspg4Q8VHY0 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.31■□□□□ 0.04
Cspg4Q8VHY0 Gm18206-201ENSMUST00000207027 926 ntBASIC15.31■□□□□ 0.04
Cspg4Q8VHY0 Gm21559-201ENSMUST00000220638 855 ntBASIC15.31■□□□□ 0.04
Cspg4Q8VHY0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cspg4Q8VHY0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cspg4Q8VHY0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cspg4Q8VHY0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cspg4Q8VHY0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.31■□□□□ 0.04
Cspg4Q8VHY0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.31■□□□□ 0.04
Cspg4Q8VHY0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.31■□□□□ 0.04
Cspg4Q8VHY0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cspg4Q8VHY0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cspg4Q8VHY0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cspg4Q8VHY0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.3■□□□□ 0.04
Cspg4Q8VHY0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.3■□□□□ 0.04
Cspg4Q8VHY0 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.3■□□□□ 0.04
Cspg4Q8VHY0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cspg4Q8VHY0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cspg4Q8VHY0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.3■□□□□ 0.04
Cspg4Q8VHY0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cspg4Q8VHY0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cspg4Q8VHY0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cspg4Q8VHY0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cspg4Q8VHY0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.3■□□□□ 0.04
Cspg4Q8VHY0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cspg4Q8VHY0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cspg4Q8VHY0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cspg4Q8VHY0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cspg4Q8VHY0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg4Q8VHY0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg4Q8VHY0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg4Q8VHY0 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.29■□□□□ 0.04
Cspg4Q8VHY0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Cspg4Q8VHY0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg4Q8VHY0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.29■□□□□ 0.04
Cspg4Q8VHY0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg4Q8VHY0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg4Q8VHY0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg4Q8VHY0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg4Q8VHY0 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.29■□□□□ 0.04
Cspg4Q8VHY0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cspg4Q8VHY0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg4Q8VHY0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cspg4Q8VHY0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cspg4Q8VHY0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg4Q8VHY0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg4Q8VHY0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg4Q8VHY0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cspg4Q8VHY0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Mir1668-201ENSMUST00000184114 107 ntBASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Gm17808-201ENSMUST00000200859 894 ntBASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Gm7638-201ENSMUST00000121348 967 ntBASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cspg4Q8VHY0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cspg4Q8VHY0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms