Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rab40cQ8VHQ4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rab40cQ8VHQ4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Rab40cQ8VHQ4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rab40cQ8VHQ4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rab40cQ8VHQ4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Rab40cQ8VHQ4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Rab40cQ8VHQ4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rab40cQ8VHQ4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rab40cQ8VHQ4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rab40cQ8VHQ4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rab40cQ8VHQ4 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.58□□□□□ -0.08
Rab40cQ8VHQ4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rab40cQ8VHQ4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rab40cQ8VHQ4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rab40cQ8VHQ4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Rab40cQ8VHQ4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rab40cQ8VHQ4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Rab40cQ8VHQ4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rab40cQ8VHQ4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.57□□□□□ -0.08
Rab40cQ8VHQ4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rab40cQ8VHQ4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Rab40cQ8VHQ4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rab40cQ8VHQ4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Rab40cQ8VHQ4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rab40cQ8VHQ4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.57□□□□□ -0.08
Rab40cQ8VHQ4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rab40cQ8VHQ4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Rab40cQ8VHQ4 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.57□□□□□ -0.08
Rab40cQ8VHQ4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rab40cQ8VHQ4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Rab40cQ8VHQ4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rab40cQ8VHQ4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Rab40cQ8VHQ4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rab40cQ8VHQ4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Rab40cQ8VHQ4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rab40cQ8VHQ4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Gm38205-201ENSMUST00000192243 258 ntBASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rab40cQ8VHQ4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rab40cQ8VHQ4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.55□□□□□ -0.08
Rab40cQ8VHQ4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rab40cQ8VHQ4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rab40cQ8VHQ4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rab40cQ8VHQ4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.55□□□□□ -0.08
Rab40cQ8VHQ4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rab40cQ8VHQ4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.55□□□□□ -0.08
Rab40cQ8VHQ4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rab40cQ8VHQ4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rab40cQ8VHQ4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.55□□□□□ -0.08
Rab40cQ8VHQ4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Rab40cQ8VHQ4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rab40cQ8VHQ4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rab40cQ8VHQ4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rab40cQ8VHQ4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rab40cQ8VHQ4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rab40cQ8VHQ4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.54□□□□□ -0.08
Rab40cQ8VHQ4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms