Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 Idnk-204ENSMUST00000226010 1898 ntBASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab40bQ8VHP8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rab40bQ8VHP8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab40bQ8VHP8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab40bQ8VHP8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab40bQ8VHP8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rab40bQ8VHP8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab40bQ8VHP8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.06■□□□□ 0.16
Rab40bQ8VHP8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab40bQ8VHP8 Gm13534-201ENSMUST00000121169 513 ntBASIC16.06■□□□□ 0.16
Rab40bQ8VHP8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.06■□□□□ 0.16
Rab40bQ8VHP8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.06■□□□□ 0.16
Rab40bQ8VHP8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab40bQ8VHP8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rab40bQ8VHP8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rab40bQ8VHP8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab40bQ8VHP8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
Rab40bQ8VHP8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab40bQ8VHP8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rab40bQ8VHP8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab40bQ8VHP8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Rab40bQ8VHP8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab40bQ8VHP8 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.05■□□□□ 0.16
Rab40bQ8VHP8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab40bQ8VHP8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab40bQ8VHP8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab40bQ8VHP8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rab40bQ8VHP8 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.05■□□□□ 0.16
Rab40bQ8VHP8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.05■□□□□ 0.16
Rab40bQ8VHP8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rab40bQ8VHP8 Gm6139-201ENSMUST00000079261 882 ntBASIC16.05■□□□□ 0.16
Rab40bQ8VHP8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab40bQ8VHP8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rab40bQ8VHP8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rab40bQ8VHP8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab40bQ8VHP8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab40bQ8VHP8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rab40bQ8VHP8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40bQ8VHP8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.04■□□□□ 0.16
Rab40bQ8VHP8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40bQ8VHP8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40bQ8VHP8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40bQ8VHP8 Gm12821-201ENSMUST00000120022 600 ntBASIC16.04■□□□□ 0.16
Rab40bQ8VHP8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Rab40bQ8VHP8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40bQ8VHP8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rab40bQ8VHP8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40bQ8VHP8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40bQ8VHP8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40bQ8VHP8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40bQ8VHP8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40bQ8VHP8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40bQ8VHP8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rab40bQ8VHP8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab40bQ8VHP8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab40bQ8VHP8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rab40bQ8VHP8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab40bQ8VHP8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.03■□□□□ 0.16
Rab40bQ8VHP8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rab40bQ8VHP8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab40bQ8VHP8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.03■□□□□ 0.16
Rab40bQ8VHP8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab40bQ8VHP8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab40bQ8VHP8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Rab40bQ8VHP8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rab40bQ8VHP8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rab40bQ8VHP8 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.03■□□□□ 0.16
Rab40bQ8VHP8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Rab40bQ8VHP8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rab40bQ8VHP8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rab40bQ8VHP8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Rab40bQ8VHP8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rab40bQ8VHP8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rab40bQ8VHP8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Rab40bQ8VHP8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rab40bQ8VHP8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Rab40bQ8VHP8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Rab40bQ8VHP8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.02■□□□□ 0.16
Rab40bQ8VHP8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rab40bQ8VHP8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rab40bQ8VHP8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rab40bQ8VHP8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rab40bQ8VHP8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.02■□□□□ 0.15
Rab40bQ8VHP8 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms