Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps4aQ8VEJ9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps4aQ8VEJ9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps4aQ8VEJ9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps4aQ8VEJ9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vps4aQ8VEJ9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Vps4aQ8VEJ9 Gm37856-201ENSMUST00000191634 999 ntBASIC17.27■□□□□ 0.36
Vps4aQ8VEJ9 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.27■□□□□ 0.36
Vps4aQ8VEJ9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps4aQ8VEJ9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps4aQ8VEJ9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps4aQ8VEJ9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps4aQ8VEJ9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.27■□□□□ 0.35
Vps4aQ8VEJ9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps4aQ8VEJ9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Vps4aQ8VEJ9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Vps4aQ8VEJ9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.27■□□□□ 0.35
Vps4aQ8VEJ9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Vps4aQ8VEJ9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps4aQ8VEJ9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps4aQ8VEJ9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps4aQ8VEJ9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Vps4aQ8VEJ9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps4aQ8VEJ9 Gm13534-201ENSMUST00000121169 513 ntBASIC17.26■□□□□ 0.35
Vps4aQ8VEJ9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.26■□□□□ 0.35
Vps4aQ8VEJ9 Gm6211-202ENSMUST00000167849 925 ntBASIC17.26■□□□□ 0.35
Vps4aQ8VEJ9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps4aQ8VEJ9 Gm6420-201ENSMUST00000193885 723 ntBASIC17.26■□□□□ 0.35
Vps4aQ8VEJ9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps4aQ8VEJ9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps4aQ8VEJ9 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.26■□□□□ 0.35
Vps4aQ8VEJ9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Vps4aQ8VEJ9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4aQ8VEJ9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4aQ8VEJ9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4aQ8VEJ9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4aQ8VEJ9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4aQ8VEJ9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Vps4aQ8VEJ9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4aQ8VEJ9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.25■□□□□ 0.35
Vps4aQ8VEJ9 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.25■□□□□ 0.35
Vps4aQ8VEJ9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Vps4aQ8VEJ9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4aQ8VEJ9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4aQ8VEJ9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4aQ8VEJ9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4aQ8VEJ9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4aQ8VEJ9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4aQ8VEJ9 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.25■□□□□ 0.35
Vps4aQ8VEJ9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4aQ8VEJ9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4aQ8VEJ9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4aQ8VEJ9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4aQ8VEJ9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4aQ8VEJ9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4aQ8VEJ9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Vps4aQ8VEJ9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Vps4aQ8VEJ9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Vps4aQ8VEJ9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4aQ8VEJ9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.24■□□□□ 0.35
Vps4aQ8VEJ9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4aQ8VEJ9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4aQ8VEJ9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Vps4aQ8VEJ9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4aQ8VEJ9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4aQ8VEJ9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps4aQ8VEJ9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Vps4aQ8VEJ9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.23■□□□□ 0.35
Vps4aQ8VEJ9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps4aQ8VEJ9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.23■□□□□ 0.35
Vps4aQ8VEJ9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps4aQ8VEJ9 Gm13836-201ENSMUST00000121159 501 ntBASIC17.23■□□□□ 0.35
Vps4aQ8VEJ9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vps4aQ8VEJ9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.23■□□□□ 0.35
Vps4aQ8VEJ9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps4aQ8VEJ9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps4aQ8VEJ9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vps4aQ8VEJ9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps4aQ8VEJ9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps4aQ8VEJ9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps4aQ8VEJ9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps4aQ8VEJ9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps4aQ8VEJ9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4aQ8VEJ9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4aQ8VEJ9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4aQ8VEJ9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4aQ8VEJ9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4aQ8VEJ9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4aQ8VEJ9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4aQ8VEJ9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4aQ8VEJ9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4aQ8VEJ9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Vps4aQ8VEJ9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4aQ8VEJ9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4aQ8VEJ9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Vps4aQ8VEJ9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Vps4aQ8VEJ9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4aQ8VEJ9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Vps4aQ8VEJ9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4aQ8VEJ9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms