Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpa1Q8VEE4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Rpa1Q8VEE4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpa1Q8VEE4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpa1Q8VEE4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rpa1Q8VEE4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpa1Q8VEE4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpa1Q8VEE4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpa1Q8VEE4 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.94■□□□□ 0.46
Rpa1Q8VEE4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpa1Q8VEE4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpa1Q8VEE4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpa1Q8VEE4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rpa1Q8VEE4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.94■□□□□ 0.46
Rpa1Q8VEE4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpa1Q8VEE4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.94■□□□□ 0.46
Rpa1Q8VEE4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rpa1Q8VEE4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Rpa1Q8VEE4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rpa1Q8VEE4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rpa1Q8VEE4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpa1Q8VEE4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rpa1Q8VEE4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpa1Q8VEE4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpa1Q8VEE4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpa1Q8VEE4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpa1Q8VEE4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rpa1Q8VEE4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Rpa1Q8VEE4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpa1Q8VEE4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpa1Q8VEE4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpa1Q8VEE4 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.93■□□□□ 0.46
Rpa1Q8VEE4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rpa1Q8VEE4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rpa1Q8VEE4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.93■□□□□ 0.46
Rpa1Q8VEE4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpa1Q8VEE4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpa1Q8VEE4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa1Q8VEE4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.91■□□□□ 0.46
Rpa1Q8VEE4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa1Q8VEE4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa1Q8VEE4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa1Q8VEE4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa1Q8VEE4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.91■□□□□ 0.46
Rpa1Q8VEE4 Gm27454-201ENSMUST00000185090 204 ntBASIC17.91■□□□□ 0.46
Rpa1Q8VEE4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.91■□□□□ 0.46
Rpa1Q8VEE4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa1Q8VEE4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa1Q8VEE4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa1Q8VEE4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.91■□□□□ 0.46
Rpa1Q8VEE4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rpa1Q8VEE4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa1Q8VEE4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa1Q8VEE4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Rpa1Q8VEE4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa1Q8VEE4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa1Q8VEE4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa1Q8VEE4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.9■□□□□ 0.46
Rpa1Q8VEE4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa1Q8VEE4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.9■□□□□ 0.46
Rpa1Q8VEE4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa1Q8VEE4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa1Q8VEE4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa1Q8VEE4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa1Q8VEE4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa1Q8VEE4 Mir7075-201ENSMUST00000184187 82 ntBASIC17.9■□□□□ 0.46
Rpa1Q8VEE4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa1Q8VEE4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa1Q8VEE4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa1Q8VEE4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa1Q8VEE4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa1Q8VEE4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa1Q8VEE4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
Rpa1Q8VEE4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa1Q8VEE4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa1Q8VEE4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Rpa1Q8VEE4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Rpa1Q8VEE4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rpa1Q8VEE4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa1Q8VEE4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms