Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Lmcd1Q8VEE1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
Lmcd1Q8VEE1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Lmcd1Q8VEE1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lmcd1Q8VEE1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lmcd1Q8VEE1 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.98■□□□□ 0.63
Lmcd1Q8VEE1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lmcd1Q8VEE1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lmcd1Q8VEE1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lmcd1Q8VEE1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lmcd1Q8VEE1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lmcd1Q8VEE1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lmcd1Q8VEE1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Lmcd1Q8VEE1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lmcd1Q8VEE1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lmcd1Q8VEE1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lmcd1Q8VEE1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lmcd1Q8VEE1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lmcd1Q8VEE1 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lmcd1Q8VEE1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lmcd1Q8VEE1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lmcd1Q8VEE1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Lmcd1Q8VEE1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Lmcd1Q8VEE1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.97■□□□□ 0.63
Lmcd1Q8VEE1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.97■□□□□ 0.63
Lmcd1Q8VEE1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lmcd1Q8VEE1 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lmcd1Q8VEE1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Lmcd1Q8VEE1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Lmcd1Q8VEE1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lmcd1Q8VEE1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lmcd1Q8VEE1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lmcd1Q8VEE1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lmcd1Q8VEE1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lmcd1Q8VEE1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lmcd1Q8VEE1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.95■□□□□ 0.62
Lmcd1Q8VEE1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Lmcd1Q8VEE1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lmcd1Q8VEE1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lmcd1Q8VEE1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Lmcd1Q8VEE1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lmcd1Q8VEE1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lmcd1Q8VEE1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lmcd1Q8VEE1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
Lmcd1Q8VEE1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.95■□□□□ 0.62
Lmcd1Q8VEE1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.95■□□□□ 0.62
Lmcd1Q8VEE1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lmcd1Q8VEE1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lmcd1Q8VEE1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lmcd1Q8VEE1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lmcd1Q8VEE1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lmcd1Q8VEE1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Lmcd1Q8VEE1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Lmcd1Q8VEE1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Lmcd1Q8VEE1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lmcd1Q8VEE1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lmcd1Q8VEE1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.94■□□□□ 0.62
Lmcd1Q8VEE1 Mir8098-201ENSMUST00000184011 137 ntBASIC18.94■□□□□ 0.62
Lmcd1Q8VEE1 Gm37935-201ENSMUST00000192012 982 ntBASIC18.94■□□□□ 0.62
Lmcd1Q8VEE1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lmcd1Q8VEE1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lmcd1Q8VEE1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.94■□□□□ 0.62
Lmcd1Q8VEE1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Lmcd1Q8VEE1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lmcd1Q8VEE1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lmcd1Q8VEE1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lmcd1Q8VEE1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.93■□□□□ 0.62
Lmcd1Q8VEE1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lmcd1Q8VEE1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.93■□□□□ 0.62
Lmcd1Q8VEE1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Lmcd1Q8VEE1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lmcd1Q8VEE1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.93■□□□□ 0.62
Lmcd1Q8VEE1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.93■□□□□ 0.62
Lmcd1Q8VEE1 Gm5864-201ENSMUST00000202263 970 ntBASIC18.93■□□□□ 0.62
Lmcd1Q8VEE1 Gm45328-201ENSMUST00000210942 917 ntBASIC18.93■□□□□ 0.62
Lmcd1Q8VEE1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lmcd1Q8VEE1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Lmcd1Q8VEE1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Lmcd1Q8VEE1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lmcd1Q8VEE1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lmcd1Q8VEE1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lmcd1Q8VEE1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Lmcd1Q8VEE1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Lmcd1Q8VEE1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lmcd1Q8VEE1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lmcd1Q8VEE1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lmcd1Q8VEE1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Lmcd1Q8VEE1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Lmcd1Q8VEE1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.92■□□□□ 0.62
Lmcd1Q8VEE1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lmcd1Q8VEE1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lmcd1Q8VEE1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lmcd1Q8VEE1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lmcd1Q8VEE1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lmcd1Q8VEE1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Lmcd1Q8VEE1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lmcd1Q8VEE1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Lmcd1Q8VEE1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lmcd1Q8VEE1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lmcd1Q8VEE1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms