Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Slc6a20aQ8VDB9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a20aQ8VDB9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a20aQ8VDB9 Idnk-204ENSMUST00000226010 1898 ntBASIC17.58■□□□□ 0.41
Slc6a20aQ8VDB9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc6a20aQ8VDB9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc6a20aQ8VDB9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc6a20aQ8VDB9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc6a20aQ8VDB9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc6a20aQ8VDB9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a20aQ8VDB9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Slc6a20aQ8VDB9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.58■□□□□ 0.4
Slc6a20aQ8VDB9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.58■□□□□ 0.4
Slc6a20aQ8VDB9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Slc6a20aQ8VDB9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.57■□□□□ 0.4
Slc6a20aQ8VDB9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20aQ8VDB9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20aQ8VDB9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20aQ8VDB9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20aQ8VDB9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20aQ8VDB9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20aQ8VDB9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Slc6a20aQ8VDB9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20aQ8VDB9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20aQ8VDB9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.57■□□□□ 0.4
Slc6a20aQ8VDB9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 Zfp783-201ENSMUST00000095946 670 ntBASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20aQ8VDB9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20aQ8VDB9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20aQ8VDB9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20aQ8VDB9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20aQ8VDB9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20aQ8VDB9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.55■□□□□ 0.4
Slc6a20aQ8VDB9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20aQ8VDB9 Gm5408-201ENSMUST00000197998 747 ntBASIC17.55■□□□□ 0.4
Slc6a20aQ8VDB9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.55■□□□□ 0.4
Slc6a20aQ8VDB9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20aQ8VDB9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Slc6a20aQ8VDB9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20aQ8VDB9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20aQ8VDB9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.55■□□□□ 0.4
Slc6a20aQ8VDB9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Slc6a20aQ8VDB9 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.55■□□□□ 0.4
Slc6a20aQ8VDB9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.55■□□□□ 0.4
Slc6a20aQ8VDB9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20aQ8VDB9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Flg-201ENSMUST00000050758 1488 ntBASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.54■□□□□ 0.4
Slc6a20aQ8VDB9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a20aQ8VDB9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a20aQ8VDB9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.53■□□□□ 0.4
Slc6a20aQ8VDB9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a20aQ8VDB9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a20aQ8VDB9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Slc6a20aQ8VDB9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a20aQ8VDB9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.53■□□□□ 0.4
Slc6a20aQ8VDB9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a20aQ8VDB9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.53■□□□□ 0.4
Slc6a20aQ8VDB9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a20aQ8VDB9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 113.7 ms