Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap2Q8VC34 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap2Q8VC34 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.57■□□□□ 0.72
Rpap2Q8VC34 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rpap2Q8VC34 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Rpap2Q8VC34 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpap2Q8VC34 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpap2Q8VC34 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpap2Q8VC34 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpap2Q8VC34 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpap2Q8VC34 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.56■□□□□ 0.72
Rpap2Q8VC34 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpap2Q8VC34 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.56■□□□□ 0.72
Rpap2Q8VC34 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpap2Q8VC34 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.56■□□□□ 0.72
Rpap2Q8VC34 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpap2Q8VC34 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpap2Q8VC34 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpap2Q8VC34 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpap2Q8VC34 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpap2Q8VC34 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpap2Q8VC34 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Gm10418-201ENSMUST00000100943 576 ntBASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpap2Q8VC34 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.54■□□□□ 0.72
Rpap2Q8VC34 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpap2Q8VC34 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.54■□□□□ 0.72
Rpap2Q8VC34 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpap2Q8VC34 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpap2Q8VC34 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rpap2Q8VC34 Gm18666-201ENSMUST00000190039 958 ntBASIC19.54■□□□□ 0.72
Rpap2Q8VC34 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpap2Q8VC34 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rpap2Q8VC34 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpap2Q8VC34 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpap2Q8VC34 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpap2Q8VC34 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpap2Q8VC34 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpap2Q8VC34 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap2Q8VC34 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap2Q8VC34 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap2Q8VC34 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap2Q8VC34 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Rpap2Q8VC34 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap2Q8VC34 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.53■□□□□ 0.72
Rpap2Q8VC34 Gm29791-202ENSMUST00000207888 369 ntBASIC19.53■□□□□ 0.72
Rpap2Q8VC34 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rpap2Q8VC34 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap2Q8VC34 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Rpap2Q8VC34 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap2Q8VC34 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpap2Q8VC34 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpap2Q8VC34 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpap2Q8VC34 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpap2Q8VC34 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rpap2Q8VC34 Rarb-207ENSMUST00000225921 2756 ntBASIC19.52■□□□□ 0.72
Rpap2Q8VC34 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rpap2Q8VC34 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpap2Q8VC34 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Rpap2Q8VC34 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rpap2Q8VC34 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rpap2Q8VC34 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.52■□□□□ 0.72
Rpap2Q8VC34 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpap2Q8VC34 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Rpap2Q8VC34 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rpap2Q8VC34 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpap2Q8VC34 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpap2Q8VC34 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpap2Q8VC34 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rpap2Q8VC34 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.51■□□□□ 0.71
Rpap2Q8VC34 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpap2Q8VC34 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
Rpap2Q8VC34 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpap2Q8VC34 Gm5643-201ENSMUST00000117081 966 ntBASIC19.51■□□□□ 0.71
Rpap2Q8VC34 Gm10653-202ENSMUST00000139570 835 ntBASIC19.51■□□□□ 0.71
Rpap2Q8VC34 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.51■□□□□ 0.71
Rpap2Q8VC34 Gm20760-201ENSMUST00000179197 648 ntBASIC19.51■□□□□ 0.71
Rpap2Q8VC34 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.51■□□□□ 0.71
Rpap2Q8VC34 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpap2Q8VC34 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Rpap2Q8VC34 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms