Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm21956-201ENSMUST00000179946 522 ntBASIC14.58□□□□□ -0.08
Nup35Q8R4R6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup35Q8R4R6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup35Q8R4R6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.58□□□□□ -0.08
Nup35Q8R4R6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup35Q8R4R6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup35Q8R4R6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup35Q8R4R6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup35Q8R4R6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nup35Q8R4R6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Nup35Q8R4R6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup35Q8R4R6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup35Q8R4R6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup35Q8R4R6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Gm13241-201ENSMUST00000094493 780 ntBASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup35Q8R4R6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nup35Q8R4R6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup35Q8R4R6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup35Q8R4R6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Nup35Q8R4R6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup35Q8R4R6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.56□□□□□ -0.08
Nup35Q8R4R6 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup35Q8R4R6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup35Q8R4R6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.56□□□□□ -0.08
Nup35Q8R4R6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup35Q8R4R6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Nup35Q8R4R6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup35Q8R4R6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup35Q8R4R6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup35Q8R4R6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup35Q8R4R6 Idnk-204ENSMUST00000226010 1898 ntBASIC14.56□□□□□ -0.08
Nup35Q8R4R6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup35Q8R4R6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup35Q8R4R6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup35Q8R4R6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup35Q8R4R6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.55□□□□□ -0.08
Nup35Q8R4R6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nup35Q8R4R6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup35Q8R4R6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Nup35Q8R4R6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup35Q8R4R6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup35Q8R4R6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup35Q8R4R6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.55□□□□□ -0.08
Nup35Q8R4R6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup35Q8R4R6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.55□□□□□ -0.08
Nup35Q8R4R6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup35Q8R4R6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup35Q8R4R6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Nup35Q8R4R6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup35Q8R4R6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup35Q8R4R6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.55□□□□□ -0.08
Nup35Q8R4R6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nup35Q8R4R6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup35Q8R4R6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.54□□□□□ -0.08
Nup35Q8R4R6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup35Q8R4R6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nup35Q8R4R6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nup35Q8R4R6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nup35Q8R4R6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.54□□□□□ -0.08
Nup35Q8R4R6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.54□□□□□ -0.08
Nup35Q8R4R6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nup35Q8R4R6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.54□□□□□ -0.08
Nup35Q8R4R6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup35Q8R4R6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nup35Q8R4R6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nup35Q8R4R6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup35Q8R4R6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup35Q8R4R6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Nup35Q8R4R6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup35Q8R4R6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup35Q8R4R6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup35Q8R4R6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nup35Q8R4R6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nup35Q8R4R6 Gm13146-201ENSMUST00000118508 780 ntBASIC14.53□□□□□ -0.08
Nup35Q8R4R6 Gm22325-201ENSMUST00000158904 308 ntBASIC14.53□□□□□ -0.08
Nup35Q8R4R6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup35Q8R4R6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.53□□□□□ -0.08
Nup35Q8R4R6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms