Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vopp1Q8R1C3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Vopp1Q8R1C3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vopp1Q8R1C3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Vopp1Q8R1C3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Vopp1Q8R1C3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vopp1Q8R1C3 Gm10418-201ENSMUST00000100943 576 ntBASIC19.02■□□□□ 0.64
Vopp1Q8R1C3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.02■□□□□ 0.64
Vopp1Q8R1C3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Vopp1Q8R1C3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.02■□□□□ 0.64
Vopp1Q8R1C3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Vopp1Q8R1C3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Vopp1Q8R1C3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vopp1Q8R1C3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vopp1Q8R1C3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Vopp1Q8R1C3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.02■□□□□ 0.64
Vopp1Q8R1C3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vopp1Q8R1C3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vopp1Q8R1C3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vopp1Q8R1C3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vopp1Q8R1C3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vopp1Q8R1C3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Vopp1Q8R1C3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vopp1Q8R1C3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vopp1Q8R1C3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vopp1Q8R1C3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vopp1Q8R1C3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vopp1Q8R1C3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vopp1Q8R1C3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vopp1Q8R1C3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vopp1Q8R1C3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Vopp1Q8R1C3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.01■□□□□ 0.63
Vopp1Q8R1C3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.01■□□□□ 0.63
Vopp1Q8R1C3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Vopp1Q8R1C3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
Vopp1Q8R1C3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vopp1Q8R1C3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vopp1Q8R1C3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vopp1Q8R1C3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vopp1Q8R1C3 Gm10616-201ENSMUST00000205285 2127 ntBASIC19■□□□□ 0.63
Vopp1Q8R1C3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Vopp1Q8R1C3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vopp1Q8R1C3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vopp1Q8R1C3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vopp1Q8R1C3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19■□□□□ 0.63
Vopp1Q8R1C3 Gm7370-201ENSMUST00000219471 767 ntBASIC19■□□□□ 0.63
Vopp1Q8R1C3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Vopp1Q8R1C3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vopp1Q8R1C3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Vopp1Q8R1C3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vopp1Q8R1C3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vopp1Q8R1C3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vopp1Q8R1C3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Vopp1Q8R1C3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.99■□□□□ 0.63
Vopp1Q8R1C3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vopp1Q8R1C3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vopp1Q8R1C3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vopp1Q8R1C3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vopp1Q8R1C3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vopp1Q8R1C3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vopp1Q8R1C3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vopp1Q8R1C3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vopp1Q8R1C3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vopp1Q8R1C3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.98■□□□□ 0.63
Vopp1Q8R1C3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.98■□□□□ 0.63
Vopp1Q8R1C3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vopp1Q8R1C3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vopp1Q8R1C3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vopp1Q8R1C3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vopp1Q8R1C3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vopp1Q8R1C3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vopp1Q8R1C3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vopp1Q8R1C3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vopp1Q8R1C3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Vopp1Q8R1C3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vopp1Q8R1C3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Vopp1Q8R1C3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vopp1Q8R1C3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vopp1Q8R1C3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vopp1Q8R1C3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.97■□□□□ 0.63
Vopp1Q8R1C3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Vopp1Q8R1C3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vopp1Q8R1C3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Vopp1Q8R1C3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Vopp1Q8R1C3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.97■□□□□ 0.63
Vopp1Q8R1C3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vopp1Q8R1C3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vopp1Q8R1C3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vopp1Q8R1C3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vopp1Q8R1C3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vopp1Q8R1C3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vopp1Q8R1C3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vopp1Q8R1C3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vopp1Q8R1C3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vopp1Q8R1C3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vopp1Q8R1C3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vopp1Q8R1C3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vopp1Q8R1C3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vopp1Q8R1C3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vopp1Q8R1C3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms