Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sf3a1Q8K4Z5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sf3a1Q8K4Z5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sf3a1Q8K4Z5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sf3a1Q8K4Z5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sf3a1Q8K4Z5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Sf3a1Q8K4Z5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sf3a1Q8K4Z5 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sf3a1Q8K4Z5 Gm8520-201ENSMUST00000186517 868 ntBASIC21.78■■□□□ 1.08
Sf3a1Q8K4Z5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sf3a1Q8K4Z5 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sf3a1Q8K4Z5 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.77■■□□□ 1.08
Sf3a1Q8K4Z5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sf3a1Q8K4Z5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Sf3a1Q8K4Z5 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Sf3a1Q8K4Z5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Sf3a1Q8K4Z5 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.77■■□□□ 1.08
Sf3a1Q8K4Z5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sf3a1Q8K4Z5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sf3a1Q8K4Z5 Gm15375-201ENSMUST00000119510 849 ntBASIC21.77■■□□□ 1.08
Sf3a1Q8K4Z5 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.77■■□□□ 1.08
Sf3a1Q8K4Z5 Mir2861-201ENSMUST00000175539 82 ntBASIC21.77■■□□□ 1.08
Sf3a1Q8K4Z5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.77■■□□□ 1.08
Sf3a1Q8K4Z5 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sf3a1Q8K4Z5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sf3a1Q8K4Z5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.77■■□□□ 1.08
Sf3a1Q8K4Z5 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sf3a1Q8K4Z5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sf3a1Q8K4Z5 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Sf3a1Q8K4Z5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sf3a1Q8K4Z5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sf3a1Q8K4Z5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sf3a1Q8K4Z5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.76■■□□□ 1.07
Sf3a1Q8K4Z5 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.76■■□□□ 1.07
Sf3a1Q8K4Z5 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sf3a1Q8K4Z5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Sf3a1Q8K4Z5 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sf3a1Q8K4Z5 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sf3a1Q8K4Z5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.76■■□□□ 1.07
Sf3a1Q8K4Z5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sf3a1Q8K4Z5 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sf3a1Q8K4Z5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sf3a1Q8K4Z5 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.76■■□□□ 1.07
Sf3a1Q8K4Z5 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sf3a1Q8K4Z5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sf3a1Q8K4Z5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sf3a1Q8K4Z5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Sf3a1Q8K4Z5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sf3a1Q8K4Z5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Sf3a1Q8K4Z5 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Sf3a1Q8K4Z5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.75■■□□□ 1.07
Sf3a1Q8K4Z5 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.75■■□□□ 1.07
Sf3a1Q8K4Z5 Mir6349-201ENSMUST00000184059 97 ntBASIC21.75■■□□□ 1.07
Sf3a1Q8K4Z5 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sf3a1Q8K4Z5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Sf3a1Q8K4Z5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sf3a1Q8K4Z5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sf3a1Q8K4Z5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sf3a1Q8K4Z5 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sf3a1Q8K4Z5 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Sf3a1Q8K4Z5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sf3a1Q8K4Z5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
Sf3a1Q8K4Z5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Sf3a1Q8K4Z5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sf3a1Q8K4Z5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Sf3a1Q8K4Z5 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.74■■□□□ 1.07
Sf3a1Q8K4Z5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.74■■□□□ 1.07
Sf3a1Q8K4Z5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sf3a1Q8K4Z5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sf3a1Q8K4Z5 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sf3a1Q8K4Z5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sf3a1Q8K4Z5 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sf3a1Q8K4Z5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sf3a1Q8K4Z5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sf3a1Q8K4Z5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sf3a1Q8K4Z5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sf3a1Q8K4Z5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.73■■□□□ 1.07
Sf3a1Q8K4Z5 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sf3a1Q8K4Z5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Sf3a1Q8K4Z5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.73■■□□□ 1.07
Sf3a1Q8K4Z5 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.73■■□□□ 1.07
Sf3a1Q8K4Z5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.73■■□□□ 1.07
Sf3a1Q8K4Z5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sf3a1Q8K4Z5 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sf3a1Q8K4Z5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sf3a1Q8K4Z5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Sf3a1Q8K4Z5 Grk6-206ENSMUST00000224995 2971 ntBASIC21.73■■□□□ 1.07
Sf3a1Q8K4Z5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
Sf3a1Q8K4Z5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Sf3a1Q8K4Z5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sf3a1Q8K4Z5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sf3a1Q8K4Z5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Sf3a1Q8K4Z5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Sf3a1Q8K4Z5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.72■■□□□ 1.07
Sf3a1Q8K4Z5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Sf3a1Q8K4Z5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.72■■□□□ 1.07
Sf3a1Q8K4Z5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sf3a1Q8K4Z5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.72■■□□□ 1.07
Sf3a1Q8K4Z5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sf3a1Q8K4Z5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms