Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Ddx54Q8K4L0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Ddx54Q8K4L0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ddx54Q8K4L0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ddx54Q8K4L0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Ddx54Q8K4L0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ddx54Q8K4L0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC23.37■■□□□ 1.33
Ddx54Q8K4L0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ddx54Q8K4L0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ddx54Q8K4L0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ddx54Q8K4L0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ddx54Q8K4L0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ddx54Q8K4L0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ddx54Q8K4L0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ddx54Q8K4L0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ddx54Q8K4L0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ddx54Q8K4L0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Ddx54Q8K4L0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ddx54Q8K4L0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Ddx54Q8K4L0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ddx54Q8K4L0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ddx54Q8K4L0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx54Q8K4L0 Gm38345-201ENSMUST00000192635 1748 ntBASIC23.36■■□□□ 1.33
Ddx54Q8K4L0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx54Q8K4L0 Olfr129-201ENSMUST00000122318 993 ntBASIC23.36■■□□□ 1.33
Ddx54Q8K4L0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx54Q8K4L0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx54Q8K4L0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx54Q8K4L0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC23.36■■□□□ 1.33
Ddx54Q8K4L0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx54Q8K4L0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC23.36■■□□□ 1.33
Ddx54Q8K4L0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx54Q8K4L0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx54Q8K4L0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx54Q8K4L0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx54Q8K4L0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ddx54Q8K4L0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Ddx54Q8K4L0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ddx54Q8K4L0 Gm11860-201ENSMUST00000122346 1010 ntBASIC23.35■■□□□ 1.33
Ddx54Q8K4L0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC23.35■■□□□ 1.33
Ddx54Q8K4L0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC23.35■■□□□ 1.33
Ddx54Q8K4L0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Ddx54Q8K4L0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Ddx54Q8K4L0 Gm27459-201ENSMUST00000184860 107 ntBASIC23.34■■□□□ 1.33
Ddx54Q8K4L0 Gm37820-201ENSMUST00000194021 2147 ntBASIC23.34■■□□□ 1.33
Ddx54Q8K4L0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC23.34■■□□□ 1.33
Ddx54Q8K4L0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ddx54Q8K4L0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ddx54Q8K4L0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ddx54Q8K4L0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ddx54Q8K4L0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.34■■□□□ 1.33
Ddx54Q8K4L0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ddx54Q8K4L0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC23.33■■□□□ 1.33
Ddx54Q8K4L0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Ddx54Q8K4L0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ddx54Q8K4L0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
Ddx54Q8K4L0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC23.33■■□□□ 1.33
Ddx54Q8K4L0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Ddx54Q8K4L0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC23.33■■□□□ 1.33
Ddx54Q8K4L0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ddx54Q8K4L0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Ddx54Q8K4L0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ddx54Q8K4L0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ddx54Q8K4L0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ddx54Q8K4L0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ddx54Q8K4L0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC23.32■■□□□ 1.32
Ddx54Q8K4L0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC23.32■■□□□ 1.32
Ddx54Q8K4L0 Gm45328-201ENSMUST00000210942 917 ntBASIC23.32■■□□□ 1.32
Ddx54Q8K4L0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ddx54Q8K4L0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ddx54Q8K4L0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ddx54Q8K4L0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ddx54Q8K4L0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ddx54Q8K4L0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ddx54Q8K4L0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ddx54Q8K4L0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
Ddx54Q8K4L0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Ddx54Q8K4L0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
Ddx54Q8K4L0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Ddx54Q8K4L0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ddx54Q8K4L0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC23.3■■□□□ 1.32
Ddx54Q8K4L0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ddx54Q8K4L0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ddx54Q8K4L0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ddx54Q8K4L0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ddx54Q8K4L0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ddx54Q8K4L0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ddx54Q8K4L0 Gm37935-201ENSMUST00000192012 982 ntBASIC23.3■■□□□ 1.32
Ddx54Q8K4L0 Gm43347-201ENSMUST00000200226 580 ntBASIC23.3■■□□□ 1.32
Ddx54Q8K4L0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ddx54Q8K4L0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ddx54Q8K4L0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Ddx54Q8K4L0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ddx54Q8K4L0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ddx54Q8K4L0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Ddx54Q8K4L0 Golph3-202ENSMUST00000226517 2359 ntBASIC23.29■■□□□ 1.32
Ddx54Q8K4L0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ddx54Q8K4L0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ddx54Q8K4L0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Ddx54Q8K4L0 Gm11452-201ENSMUST00000122376 690 ntBASIC23.29■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms