Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf4Q8K4J2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf4Q8K4J2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.26■□□□□ 0.19
Ebf4Q8K4J2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf4Q8K4J2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.26■□□□□ 0.19
Ebf4Q8K4J2 Spcs1-204ENSMUST00000226782 949 ntBASIC16.26■□□□□ 0.19
Ebf4Q8K4J2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf4Q8K4J2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf4Q8K4J2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf4Q8K4J2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.26■□□□□ 0.19
Ebf4Q8K4J2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.26■□□□□ 0.19
Ebf4Q8K4J2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf4Q8K4J2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.26■□□□□ 0.19
Ebf4Q8K4J2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf4Q8K4J2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf4Q8K4J2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.25■□□□□ 0.19
Ebf4Q8K4J2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf4Q8K4J2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf4Q8K4J2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf4Q8K4J2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf4Q8K4J2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.25■□□□□ 0.19
Ebf4Q8K4J2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.25■□□□□ 0.19
Ebf4Q8K4J2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf4Q8K4J2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Ebf4Q8K4J2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf4Q8K4J2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf4Q8K4J2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ebf4Q8K4J2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf4Q8K4J2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf4Q8K4J2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf4Q8K4J2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf4Q8K4J2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf4Q8K4J2 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.24■□□□□ 0.19
Ebf4Q8K4J2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.24■□□□□ 0.19
Ebf4Q8K4J2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf4Q8K4J2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf4Q8K4J2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf4Q8K4J2 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.24■□□□□ 0.19
Ebf4Q8K4J2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf4Q8K4J2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf4Q8K4J2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf4Q8K4J2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ebf4Q8K4J2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Gm14117-201ENSMUST00000122417 843 ntBASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf4Q8K4J2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.22■□□□□ 0.19
Ebf4Q8K4J2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf4Q8K4J2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ebf4Q8K4J2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf4Q8K4J2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf4Q8K4J2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.21■□□□□ 0.19
Ebf4Q8K4J2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf4Q8K4J2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf4Q8K4J2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ebf4Q8K4J2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf4Q8K4J2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.21■□□□□ 0.19
Ebf4Q8K4J2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ebf4Q8K4J2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebf4Q8K4J2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms