Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.69■□□□□ 0.42
Mrpl47Q8K2Y7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl47Q8K2Y7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl47Q8K2Y7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl47Q8K2Y7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl47Q8K2Y7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl47Q8K2Y7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl47Q8K2Y7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl47Q8K2Y7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl47Q8K2Y7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
Mrpl47Q8K2Y7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl47Q8K2Y7 Nespas-201ENSMUST00000143738 1083 ntBASIC17.68■□□□□ 0.42
Mrpl47Q8K2Y7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl47Q8K2Y7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.68■□□□□ 0.42
Mrpl47Q8K2Y7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl47Q8K2Y7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Mrpl47Q8K2Y7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl47Q8K2Y7 Gm10493-201ENSMUST00000097270 612 ntBASIC17.68■□□□□ 0.42
Mrpl47Q8K2Y7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl47Q8K2Y7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl47Q8K2Y7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.68■□□□□ 0.42
Mrpl47Q8K2Y7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl47Q8K2Y7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mrpl47Q8K2Y7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.67■□□□□ 0.42
Mrpl47Q8K2Y7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl47Q8K2Y7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl47Q8K2Y7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl47Q8K2Y7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl47Q8K2Y7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.67■□□□□ 0.42
Mrpl47Q8K2Y7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Mrpl47Q8K2Y7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Mrpl47Q8K2Y7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.67■□□□□ 0.42
Mrpl47Q8K2Y7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.67■□□□□ 0.42
Mrpl47Q8K2Y7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.67■□□□□ 0.42
Mrpl47Q8K2Y7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl47Q8K2Y7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl47Q8K2Y7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl47Q8K2Y7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl47Q8K2Y7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.67■□□□□ 0.42
Mrpl47Q8K2Y7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl47Q8K2Y7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl47Q8K2Y7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mrpl47Q8K2Y7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Mrpl47Q8K2Y7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl47Q8K2Y7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl47Q8K2Y7 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.65■□□□□ 0.42
Mrpl47Q8K2Y7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl47Q8K2Y7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl47Q8K2Y7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl47Q8K2Y7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl47Q8K2Y7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.65■□□□□ 0.42
Mrpl47Q8K2Y7 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.65■□□□□ 0.42
Mrpl47Q8K2Y7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl47Q8K2Y7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl47Q8K2Y7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl47Q8K2Y7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl47Q8K2Y7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mrpl47Q8K2Y7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Mrpl47Q8K2Y7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Mrpl47Q8K2Y7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Mrpl47Q8K2Y7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Mrpl47Q8K2Y7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Mrpl47Q8K2Y7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Mrpl47Q8K2Y7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl47Q8K2Y7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl47Q8K2Y7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Mrpl47Q8K2Y7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl47Q8K2Y7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Mrpl47Q8K2Y7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl47Q8K2Y7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl47Q8K2Y7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl47Q8K2Y7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl47Q8K2Y7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl47Q8K2Y7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mrpl47Q8K2Y7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mrpl47Q8K2Y7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mrpl47Q8K2Y7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mrpl47Q8K2Y7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mrpl47Q8K2Y7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mrpl47Q8K2Y7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms