Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1aQ8CIG0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1aQ8CIG0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1aQ8CIG0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1aQ8CIG0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1aQ8CIG0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1aQ8CIG0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1aQ8CIG0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Depdc1aQ8CIG0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1aQ8CIG0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.13■□□□□ 0.81
Depdc1aQ8CIG0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.13■□□□□ 0.81
Depdc1aQ8CIG0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.13■□□□□ 0.81
Depdc1aQ8CIG0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.13■□□□□ 0.81
Depdc1aQ8CIG0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1aQ8CIG0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1aQ8CIG0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1aQ8CIG0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Gm12085-201ENSMUST00000119263 940 ntBASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1aQ8CIG0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Depdc1aQ8CIG0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Depdc1aQ8CIG0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Depdc1aQ8CIG0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Depdc1aQ8CIG0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Depdc1aQ8CIG0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Depdc1aQ8CIG0 Gm13836-201ENSMUST00000121159 501 ntBASIC20.11■□□□□ 0.81
Depdc1aQ8CIG0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Depdc1aQ8CIG0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.11■□□□□ 0.81
Depdc1aQ8CIG0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.11■□□□□ 0.81
Depdc1aQ8CIG0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Depdc1aQ8CIG0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Depdc1aQ8CIG0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Depdc1aQ8CIG0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Depdc1aQ8CIG0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Depdc1aQ8CIG0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Depdc1aQ8CIG0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Depdc1aQ8CIG0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1aQ8CIG0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1aQ8CIG0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1aQ8CIG0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1aQ8CIG0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
Depdc1aQ8CIG0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1aQ8CIG0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1aQ8CIG0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.1■□□□□ 0.81
Depdc1aQ8CIG0 Gm11539-201ENSMUST00000119837 557 ntBASIC20.1■□□□□ 0.81
Depdc1aQ8CIG0 Gm13436-201ENSMUST00000120418 567 ntBASIC20.1■□□□□ 0.81
Depdc1aQ8CIG0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.1■□□□□ 0.81
Depdc1aQ8CIG0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1aQ8CIG0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1aQ8CIG0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1aQ8CIG0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1aQ8CIG0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1aQ8CIG0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Depdc1aQ8CIG0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Depdc1aQ8CIG0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.09■□□□□ 0.81
Depdc1aQ8CIG0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Depdc1aQ8CIG0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Depdc1aQ8CIG0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Depdc1aQ8CIG0 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.09■□□□□ 0.81
Depdc1aQ8CIG0 Gm9987-201ENSMUST00000069768 567 ntBASIC20.09■□□□□ 0.81
Depdc1aQ8CIG0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Depdc1aQ8CIG0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Depdc1aQ8CIG0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Depdc1aQ8CIG0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Depdc1aQ8CIG0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Depdc1aQ8CIG0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Depdc1aQ8CIG0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Depdc1aQ8CIG0 Gm6433-201ENSMUST00000118634 875 ntBASIC20.08■□□□□ 0.81
Depdc1aQ8CIG0 Gm13559-201ENSMUST00000120476 863 ntBASIC20.08■□□□□ 0.81
Depdc1aQ8CIG0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Depdc1aQ8CIG0 Gm38027-201ENSMUST00000192315 235 ntBASIC20.08■□□□□ 0.81
Depdc1aQ8CIG0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.08■□□□□ 0.81
Depdc1aQ8CIG0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Depdc1aQ8CIG0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Depdc1aQ8CIG0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms