Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Zc3h3Q8CHP0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Gm11452-201ENSMUST00000122376 690 ntBASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h3Q8CHP0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h3Q8CHP0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h3Q8CHP0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h3Q8CHP0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h3Q8CHP0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h3Q8CHP0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h3Q8CHP0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h3Q8CHP0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Zc3h3Q8CHP0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h3Q8CHP0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Zc3h3Q8CHP0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Zc3h3Q8CHP0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h3Q8CHP0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h3Q8CHP0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h3Q8CHP0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h3Q8CHP0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h3Q8CHP0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h3Q8CHP0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h3Q8CHP0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h3Q8CHP0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Zc3h3Q8CHP0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.43■□□□□ 0.38
Zc3h3Q8CHP0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h3Q8CHP0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.43■□□□□ 0.38
Zc3h3Q8CHP0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.43■□□□□ 0.38
Zc3h3Q8CHP0 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.43■□□□□ 0.38
Zc3h3Q8CHP0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h3Q8CHP0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.43■□□□□ 0.38
Zc3h3Q8CHP0 Gm10566-201ENSMUST00000086739 996 ntBASIC17.43■□□□□ 0.38
Zc3h3Q8CHP0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Zc3h3Q8CHP0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h3Q8CHP0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h3Q8CHP0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h3Q8CHP0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h3Q8CHP0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h3Q8CHP0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h3Q8CHP0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h3Q8CHP0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Zc3h3Q8CHP0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.42■□□□□ 0.38
Zc3h3Q8CHP0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h3Q8CHP0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h3Q8CHP0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h3Q8CHP0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h3Q8CHP0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Zc3h3Q8CHP0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h3Q8CHP0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h3Q8CHP0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Zc3h3Q8CHP0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Zc3h3Q8CHP0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h3Q8CHP0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h3Q8CHP0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h3Q8CHP0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
Zc3h3Q8CHP0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h3Q8CHP0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h3Q8CHP0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h3Q8CHP0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h3Q8CHP0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Zc3h3Q8CHP0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Zc3h3Q8CHP0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h3Q8CHP0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h3Q8CHP0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h3Q8CHP0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h3Q8CHP0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3h3Q8CHP0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3h3Q8CHP0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Zc3h3Q8CHP0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.4■□□□□ 0.38
Zc3h3Q8CHP0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Zc3h3Q8CHP0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3h3Q8CHP0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Zc3h3Q8CHP0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3h3Q8CHP0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3h3Q8CHP0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.4■□□□□ 0.38
Zc3h3Q8CHP0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.4■□□□□ 0.38
Zc3h3Q8CHP0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3h3Q8CHP0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3h3Q8CHP0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3h3Q8CHP0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3h3Q8CHP0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Zc3h3Q8CHP0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms