Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rab11fip3Q8CHD8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC23.08■■□□□ 1.29
Rab11fip3Q8CHD8 Gm38027-201ENSMUST00000192315 235 ntBASIC23.08■■□□□ 1.29
Rab11fip3Q8CHD8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Rab11fip3Q8CHD8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rab11fip3Q8CHD8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rab11fip3Q8CHD8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Rab11fip3Q8CHD8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rab11fip3Q8CHD8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC23.07■■□□□ 1.28
Rab11fip3Q8CHD8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rab11fip3Q8CHD8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rab11fip3Q8CHD8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Rab11fip3Q8CHD8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC23.07■■□□□ 1.28
Rab11fip3Q8CHD8 Gm11539-201ENSMUST00000119837 557 ntBASIC23.07■■□□□ 1.28
Rab11fip3Q8CHD8 Gm13436-201ENSMUST00000120418 567 ntBASIC23.07■■□□□ 1.28
Rab11fip3Q8CHD8 Gm27463-201ENSMUST00000183569 57 ntBASIC23.07■■□□□ 1.28
Rab11fip3Q8CHD8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rab11fip3Q8CHD8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rab11fip3Q8CHD8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Rab11fip3Q8CHD8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rab11fip3Q8CHD8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rab11fip3Q8CHD8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rab11fip3Q8CHD8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rab11fip3Q8CHD8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rab11fip3Q8CHD8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rab11fip3Q8CHD8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC23.06■■□□□ 1.28
Rab11fip3Q8CHD8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rab11fip3Q8CHD8 Gm12085-201ENSMUST00000119263 940 ntBASIC23.06■■□□□ 1.28
Rab11fip3Q8CHD8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rab11fip3Q8CHD8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC23.06■■□□□ 1.28
Rab11fip3Q8CHD8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rab11fip3Q8CHD8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
Rab11fip3Q8CHD8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rab11fip3Q8CHD8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rab11fip3Q8CHD8 Gm5112-201ENSMUST00000204407 2368 ntBASIC23.06■■□□□ 1.28
Rab11fip3Q8CHD8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Rab11fip3Q8CHD8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rab11fip3Q8CHD8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rab11fip3Q8CHD8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Rab11fip3Q8CHD8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rab11fip3Q8CHD8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rab11fip3Q8CHD8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rab11fip3Q8CHD8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rab11fip3Q8CHD8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rab11fip3Q8CHD8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Rab11fip3Q8CHD8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC23.05■■□□□ 1.28
Rab11fip3Q8CHD8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rab11fip3Q8CHD8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rab11fip3Q8CHD8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rab11fip3Q8CHD8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC23.04■■□□□ 1.28
Rab11fip3Q8CHD8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rab11fip3Q8CHD8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC23.04■■□□□ 1.28
Rab11fip3Q8CHD8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rab11fip3Q8CHD8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rab11fip3Q8CHD8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rab11fip3Q8CHD8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rab11fip3Q8CHD8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rab11fip3Q8CHD8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rab11fip3Q8CHD8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rab11fip3Q8CHD8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rab11fip3Q8CHD8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Rab11fip3Q8CHD8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rab11fip3Q8CHD8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Rab11fip3Q8CHD8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Rab11fip3Q8CHD8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rab11fip3Q8CHD8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rab11fip3Q8CHD8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rab11fip3Q8CHD8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rab11fip3Q8CHD8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC23.03■■□□□ 1.28
Rab11fip3Q8CHD8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rab11fip3Q8CHD8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Rab11fip3Q8CHD8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rab11fip3Q8CHD8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rab11fip3Q8CHD8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Rab11fip3Q8CHD8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rab11fip3Q8CHD8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rab11fip3Q8CHD8 Gm13401-201ENSMUST00000117074 291 ntBASIC23.02■■□□□ 1.28
Rab11fip3Q8CHD8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rab11fip3Q8CHD8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rab11fip3Q8CHD8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rab11fip3Q8CHD8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC23.02■■□□□ 1.28
Rab11fip3Q8CHD8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rab11fip3Q8CHD8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rab11fip3Q8CHD8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rab11fip3Q8CHD8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC23.02■■□□□ 1.27
Rab11fip3Q8CHD8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rab11fip3Q8CHD8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rab11fip3Q8CHD8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Rab11fip3Q8CHD8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rab11fip3Q8CHD8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rab11fip3Q8CHD8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rab11fip3Q8CHD8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rab11fip3Q8CHD8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rab11fip3Q8CHD8 Gm10231-201ENSMUST00000181584 441 ntBASIC23.01■■□□□ 1.27
Rab11fip3Q8CHD8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rab11fip3Q8CHD8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Rab11fip3Q8CHD8 Gm10175-202ENSMUST00000208752 441 ntBASIC23.01■■□□□ 1.27
Rab11fip3Q8CHD8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC23.01■■□□□ 1.27
Rab11fip3Q8CHD8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Rab11fip3Q8CHD8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms