Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.61■□□□□ 0.57
Rp1l1Q8CGM2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rp1l1Q8CGM2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rp1l1Q8CGM2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rp1l1Q8CGM2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.6■□□□□ 0.57
Rp1l1Q8CGM2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Rp1l1Q8CGM2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rp1l1Q8CGM2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rp1l1Q8CGM2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.6■□□□□ 0.57
Rp1l1Q8CGM2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rp1l1Q8CGM2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rp1l1Q8CGM2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.6■□□□□ 0.57
Rp1l1Q8CGM2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rp1l1Q8CGM2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.6■□□□□ 0.57
Rp1l1Q8CGM2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.6■□□□□ 0.57
Rp1l1Q8CGM2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rp1l1Q8CGM2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rp1l1Q8CGM2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rp1l1Q8CGM2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rp1l1Q8CGM2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rp1l1Q8CGM2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rp1l1Q8CGM2 Gm5867-201ENSMUST00000063197 592 ntBASIC18.59■□□□□ 0.57
Rp1l1Q8CGM2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rp1l1Q8CGM2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rp1l1Q8CGM2 Actl10-202ENSMUST00000226583 1501 ntBASIC18.59■□□□□ 0.57
Rp1l1Q8CGM2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rp1l1Q8CGM2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Rp1l1Q8CGM2 Olfr129-201ENSMUST00000122318 993 ntBASIC18.58■□□□□ 0.57
Rp1l1Q8CGM2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.58■□□□□ 0.57
Rp1l1Q8CGM2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.58■□□□□ 0.57
Rp1l1Q8CGM2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rp1l1Q8CGM2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rp1l1Q8CGM2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rp1l1Q8CGM2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
Rp1l1Q8CGM2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rp1l1Q8CGM2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rp1l1Q8CGM2 Gm27742-201ENSMUST00000184667 60 ntBASIC18.58■□□□□ 0.56
Rp1l1Q8CGM2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rp1l1Q8CGM2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.57■□□□□ 0.56
Rp1l1Q8CGM2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rp1l1Q8CGM2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rp1l1Q8CGM2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rp1l1Q8CGM2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rp1l1Q8CGM2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rp1l1Q8CGM2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rp1l1Q8CGM2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rp1l1Q8CGM2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rp1l1Q8CGM2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rp1l1Q8CGM2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rp1l1Q8CGM2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rp1l1Q8CGM2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rp1l1Q8CGM2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Rp1l1Q8CGM2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rp1l1Q8CGM2 Gm27459-201ENSMUST00000184860 107 ntBASIC18.55■□□□□ 0.56
Rp1l1Q8CGM2 Gm43514-201ENSMUST00000198852 424 ntBASIC18.55■□□□□ 0.56
Rp1l1Q8CGM2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rp1l1Q8CGM2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rp1l1Q8CGM2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rp1l1Q8CGM2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rp1l1Q8CGM2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rp1l1Q8CGM2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rp1l1Q8CGM2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rp1l1Q8CGM2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Rp1l1Q8CGM2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rp1l1Q8CGM2 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.54■□□□□ 0.56
Rp1l1Q8CGM2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rp1l1Q8CGM2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rp1l1Q8CGM2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rp1l1Q8CGM2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rp1l1Q8CGM2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rp1l1Q8CGM2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rp1l1Q8CGM2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rp1l1Q8CGM2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rp1l1Q8CGM2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rp1l1Q8CGM2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rp1l1Q8CGM2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rp1l1Q8CGM2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.53■□□□□ 0.56
Rp1l1Q8CGM2 Birc2-201ENSMUST00000054878 378 ntBASIC18.53■□□□□ 0.56
Rp1l1Q8CGM2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rp1l1Q8CGM2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms