Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ShfQ8CG80 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.9■□□□□ 0.14
ShfQ8CG80 Gm18671-201ENSMUST00000214826 683 ntBASIC15.9■□□□□ 0.14
ShfQ8CG80 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.9■□□□□ 0.14
ShfQ8CG80 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
ShfQ8CG80 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
ShfQ8CG80 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
ShfQ8CG80 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ShfQ8CG80 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ShfQ8CG80 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.9■□□□□ 0.14
ShfQ8CG80 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ShfQ8CG80 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ShfQ8CG80 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ShfQ8CG80 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.9■□□□□ 0.14
ShfQ8CG80 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
ShfQ8CG80 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ShfQ8CG80 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.89■□□□□ 0.13
ShfQ8CG80 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ShfQ8CG80 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ShfQ8CG80 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ShfQ8CG80 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ShfQ8CG80 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ShfQ8CG80 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ShfQ8CG80 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ShfQ8CG80 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ShfQ8CG80 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.89■□□□□ 0.13
ShfQ8CG80 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.89■□□□□ 0.13
ShfQ8CG80 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ShfQ8CG80 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ShfQ8CG80 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ShfQ8CG80 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
ShfQ8CG80 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ShfQ8CG80 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.89■□□□□ 0.13
ShfQ8CG80 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ShfQ8CG80 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ShfQ8CG80 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ShfQ8CG80 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ShfQ8CG80 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ShfQ8CG80 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ShfQ8CG80 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ShfQ8CG80 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ShfQ8CG80 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ShfQ8CG80 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ShfQ8CG80 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ShfQ8CG80 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ShfQ8CG80 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.88■□□□□ 0.13
ShfQ8CG80 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.88■□□□□ 0.13
ShfQ8CG80 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ShfQ8CG80 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.88■□□□□ 0.13
ShfQ8CG80 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.88■□□□□ 0.13
ShfQ8CG80 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ShfQ8CG80 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ShfQ8CG80 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ShfQ8CG80 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ShfQ8CG80 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ShfQ8CG80 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ShfQ8CG80 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.88■□□□□ 0.13
ShfQ8CG80 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ShfQ8CG80 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ShfQ8CG80 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
ShfQ8CG80 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ShfQ8CG80 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ShfQ8CG80 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ShfQ8CG80 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
ShfQ8CG80 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ShfQ8CG80 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ShfQ8CG80 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ShfQ8CG80 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
ShfQ8CG80 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.87■□□□□ 0.13
ShfQ8CG80 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.87■□□□□ 0.13
ShfQ8CG80 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.87■□□□□ 0.13
ShfQ8CG80 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ShfQ8CG80 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
ShfQ8CG80 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ShfQ8CG80 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ShfQ8CG80 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ShfQ8CG80 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ShfQ8CG80 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ShfQ8CG80 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ShfQ8CG80 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ShfQ8CG80 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ShfQ8CG80 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ShfQ8CG80 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ShfQ8CG80 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ShfQ8CG80 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ShfQ8CG80 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
ShfQ8CG80 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ShfQ8CG80 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ShfQ8CG80 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.86■□□□□ 0.13
ShfQ8CG80 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ShfQ8CG80 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ShfQ8CG80 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ShfQ8CG80 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
ShfQ8CG80 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ShfQ8CG80 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
ShfQ8CG80 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.86■□□□□ 0.13
ShfQ8CG80 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ShfQ8CG80 Gm38285-201ENSMUST00000192928 922 ntBASIC15.86■□□□□ 0.13
ShfQ8CG80 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ShfQ8CG80 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms