Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc2Q8CG48 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Smc2Q8CG48 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc2Q8CG48 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc2Q8CG48 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc2Q8CG48 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc2Q8CG48 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc2Q8CG48 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smc2Q8CG48 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc2Q8CG48 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc2Q8CG48 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Smc2Q8CG48 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc2Q8CG48 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.4■□□□□ 0.86
Smc2Q8CG48 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.4■□□□□ 0.86
Smc2Q8CG48 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc2Q8CG48 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc2Q8CG48 Gm44549-201ENSMUST00000208351 577 ntBASIC20.4■□□□□ 0.86
Smc2Q8CG48 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.4■□□□□ 0.86
Smc2Q8CG48 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc2Q8CG48 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc2Q8CG48 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc2Q8CG48 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc2Q8CG48 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smc2Q8CG48 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smc2Q8CG48 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smc2Q8CG48 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc2Q8CG48 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Smc2Q8CG48 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc2Q8CG48 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Smc2Q8CG48 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.39■□□□□ 0.85
Smc2Q8CG48 Gm12933-201ENSMUST00000120203 872 ntBASIC20.39■□□□□ 0.85
Smc2Q8CG48 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smc2Q8CG48 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.39■□□□□ 0.85
Smc2Q8CG48 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc2Q8CG48 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Smc2Q8CG48 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Smc2Q8CG48 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Smc2Q8CG48 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc2Q8CG48 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc2Q8CG48 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc2Q8CG48 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc2Q8CG48 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Smc2Q8CG48 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc2Q8CG48 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc2Q8CG48 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc2Q8CG48 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc2Q8CG48 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Smc2Q8CG48 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc2Q8CG48 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.38■□□□□ 0.85
Smc2Q8CG48 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.38■□□□□ 0.85
Smc2Q8CG48 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc2Q8CG48 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc2Q8CG48 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc2Q8CG48 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc2Q8CG48 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc2Q8CG48 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc2Q8CG48 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.37■□□□□ 0.85
Smc2Q8CG48 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.37■□□□□ 0.85
Smc2Q8CG48 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smc2Q8CG48 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.37■□□□□ 0.85
Smc2Q8CG48 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Smc2Q8CG48 Gm13148-201ENSMUST00000118892 745 ntBASIC20.37■□□□□ 0.85
Smc2Q8CG48 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Smc2Q8CG48 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc2Q8CG48 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc2Q8CG48 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smc2Q8CG48 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smc2Q8CG48 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smc2Q8CG48 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc2Q8CG48 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc2Q8CG48 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc2Q8CG48 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc2Q8CG48 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc2Q8CG48 Gm26524-201ENSMUST00000192339 390 ntBASIC20.36■□□□□ 0.85
Smc2Q8CG48 Gm38285-201ENSMUST00000192928 922 ntBASIC20.36■□□□□ 0.85
Smc2Q8CG48 Rab3c-203ENSMUST00000224180 967 ntBASIC20.36■□□□□ 0.85
Smc2Q8CG48 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Smc2Q8CG48 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc2Q8CG48 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc2Q8CG48 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc2Q8CG48 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Smc2Q8CG48 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc2Q8CG48 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc2Q8CG48 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smc2Q8CG48 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smc2Q8CG48 Gm8969-201ENSMUST00000199694 526 ntBASIC20.35■□□□□ 0.85
Smc2Q8CG48 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc2Q8CG48 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smc2Q8CG48 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Smc2Q8CG48 Flg-201ENSMUST00000050758 1488 ntBASIC20.35■□□□□ 0.85
Smc2Q8CG48 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc2Q8CG48 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc2Q8CG48 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smc2Q8CG48 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc2Q8CG48 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc2Q8CG48 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc2Q8CG48 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.34■□□□□ 0.85
Smc2Q8CG48 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Smc2Q8CG48 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.34■□□□□ 0.85
Smc2Q8CG48 Gm37179-201ENSMUST00000194862 823 ntBASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms