Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q8CD60 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Q8CD60 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q8CD60 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q8CD60 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.71■□□□□ 0.59
Q8CD60 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8CD60 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8CD60 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8CD60 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.7■□□□□ 0.58
Q8CD60 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.7■□□□□ 0.58
Q8CD60 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8CD60 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8CD60 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Q8CD60 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Q8CD60 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Q8CD60 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Q8CD60 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8CD60 Gm10138-203ENSMUST00000206952 366 ntBASIC18.7■□□□□ 0.58
Q8CD60 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.7■□□□□ 0.58
Q8CD60 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.7■□□□□ 0.58
Q8CD60 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.7■□□□□ 0.58
Q8CD60 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Q8CD60 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Q8CD60 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8CD60 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Q8CD60 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.7■□□□□ 0.58
Q8CD60 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Q8CD60 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Q8CD60 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q8CD60 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Q8CD60 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q8CD60 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Q8CD60 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q8CD60 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Q8CD60 Gm20760-201ENSMUST00000179197 648 ntBASIC18.69■□□□□ 0.58
Q8CD60 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q8CD60 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q8CD60 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q8CD60 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q8CD60 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Q8CD60 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Q8CD60 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Q8CD60 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q8CD60 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q8CD60 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q8CD60 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.68■□□□□ 0.58
Q8CD60 Gm15375-201ENSMUST00000119510 849 ntBASIC18.68■□□□□ 0.58
Q8CD60 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q8CD60 Idnk-204ENSMUST00000226010 1898 ntBASIC18.68■□□□□ 0.58
Q8CD60 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q8CD60 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q8CD60 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q8CD60 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.68■□□□□ 0.58
Q8CD60 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Q8CD60 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q8CD60 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q8CD60 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.67■□□□□ 0.58
Q8CD60 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.67■□□□□ 0.58
Q8CD60 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q8CD60 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Q8CD60 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q8CD60 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q8CD60 Gm5643-201ENSMUST00000117081 966 ntBASIC18.67■□□□□ 0.58
Q8CD60 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.67■□□□□ 0.58
Q8CD60 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q8CD60 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q8CD60 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q8CD60 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q8CD60 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Q8CD60 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q8CD60 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q8CD60 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q8CD60 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q8CD60 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q8CD60 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q8CD60 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.66■□□□□ 0.58
Q8CD60 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.66■□□□□ 0.58
Q8CD60 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.66■□□□□ 0.58
Q8CD60 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Q8CD60 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q8CD60 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q8CD60 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Q8CD60 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q8CD60 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q8CD60 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q8CD60 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Q8CD60 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q8CD60 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q8CD60 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q8CD60 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q8CD60 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.65■□□□□ 0.58
Q8CD60 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q8CD60 Gm18666-201ENSMUST00000190039 958 ntBASIC18.65■□□□□ 0.58
Q8CD60 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.65■□□□□ 0.58
Q8CD60 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.65■□□□□ 0.58
Q8CD60 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q8CD60 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.65■□□□□ 0.58
Q8CD60 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.65■□□□□ 0.58
Q8CD60 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Q8CD60 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms