Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.07■□□□□ 0.16
Col6a6Q8C6K9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col6a6Q8C6K9 Golph3-205ENSMUST00000228671 2842 ntBASIC16.07■□□□□ 0.16
Col6a6Q8C6K9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col6a6Q8C6K9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Col6a6Q8C6K9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col6a6Q8C6K9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col6a6Q8C6K9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Col6a6Q8C6K9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Col6a6Q8C6K9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Col6a6Q8C6K9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col6a6Q8C6K9 Golph3-202ENSMUST00000226517 2359 ntBASIC16.05■□□□□ 0.16
Col6a6Q8C6K9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col6a6Q8C6K9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Col6a6Q8C6K9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col6a6Q8C6K9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col6a6Q8C6K9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.05■□□□□ 0.16
Col6a6Q8C6K9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Col6a6Q8C6K9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col6a6Q8C6K9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col6a6Q8C6K9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col6a6Q8C6K9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.05■□□□□ 0.16
Col6a6Q8C6K9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col6a6Q8C6K9 Gm7638-201ENSMUST00000121348 967 ntBASIC16.05■□□□□ 0.16
Col6a6Q8C6K9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col6a6Q8C6K9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col6a6Q8C6K9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col6a6Q8C6K9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col6a6Q8C6K9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.04■□□□□ 0.16
Col6a6Q8C6K9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col6a6Q8C6K9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col6a6Q8C6K9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col6a6Q8C6K9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col6a6Q8C6K9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col6a6Q8C6K9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col6a6Q8C6K9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.03■□□□□ 0.16
Col6a6Q8C6K9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col6a6Q8C6K9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col6a6Q8C6K9 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.03■□□□□ 0.16
Col6a6Q8C6K9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Col6a6Q8C6K9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col6a6Q8C6K9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col6a6Q8C6K9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Col6a6Q8C6K9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Col6a6Q8C6K9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col6a6Q8C6K9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col6a6Q8C6K9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col6a6Q8C6K9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col6a6Q8C6K9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Col6a6Q8C6K9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col6a6Q8C6K9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.02■□□□□ 0.16
Col6a6Q8C6K9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.02■□□□□ 0.16
Col6a6Q8C6K9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col6a6Q8C6K9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col6a6Q8C6K9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col6a6Q8C6K9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col6a6Q8C6K9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col6a6Q8C6K9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col6a6Q8C6K9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col6a6Q8C6K9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col6a6Q8C6K9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.02■□□□□ 0.15
Col6a6Q8C6K9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col6a6Q8C6K9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col6a6Q8C6K9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
Col6a6Q8C6K9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Col6a6Q8C6K9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.02■□□□□ 0.15
Col6a6Q8C6K9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.02■□□□□ 0.15
Col6a6Q8C6K9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col6a6Q8C6K9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.02■□□□□ 0.15
Col6a6Q8C6K9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Mir1668-201ENSMUST00000184114 107 ntBASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Gm29518-201ENSMUST00000190858 372 ntBASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Gm21559-201ENSMUST00000220638 855 ntBASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Gm8587-201ENSMUST00000076538 843 ntBASIC16.01■□□□□ 0.15
Col6a6Q8C6K9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col6a6Q8C6K9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Col6a6Q8C6K9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col6a6Q8C6K9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Col6a6Q8C6K9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Col6a6Q8C6K9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col6a6Q8C6K9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms