Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp44Q8C2S0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp44Q8C2S0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp44Q8C2S0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp44Q8C2S0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp44Q8C2S0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp44Q8C2S0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.91■□□□□ 0.94
Usp44Q8C2S0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.91■□□□□ 0.94
Usp44Q8C2S0 Gm10698-201ENSMUST00000182663 604 ntBASIC20.91■□□□□ 0.94
Usp44Q8C2S0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp44Q8C2S0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp44Q8C2S0 Gm42545-201ENSMUST00000202755 922 ntBASIC20.91■□□□□ 0.94
Usp44Q8C2S0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp44Q8C2S0 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.91■□□□□ 0.94
Usp44Q8C2S0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp44Q8C2S0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.91■□□□□ 0.94
Usp44Q8C2S0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp44Q8C2S0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp44Q8C2S0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp44Q8C2S0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.9■□□□□ 0.94
Usp44Q8C2S0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp44Q8C2S0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp44Q8C2S0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp44Q8C2S0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp44Q8C2S0 Gm10418-201ENSMUST00000100943 576 ntBASIC20.9■□□□□ 0.94
Usp44Q8C2S0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.9■□□□□ 0.94
Usp44Q8C2S0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp44Q8C2S0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp44Q8C2S0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp44Q8C2S0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.9■□□□□ 0.94
Usp44Q8C2S0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp44Q8C2S0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp44Q8C2S0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Usp44Q8C2S0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp44Q8C2S0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp44Q8C2S0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Usp44Q8C2S0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.89■□□□□ 0.94
Usp44Q8C2S0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp44Q8C2S0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.89■□□□□ 0.93
Usp44Q8C2S0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp44Q8C2S0 Gm37292-201ENSMUST00000192062 758 ntBASIC20.89■□□□□ 0.93
Usp44Q8C2S0 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.89■□□□□ 0.93
Usp44Q8C2S0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp44Q8C2S0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.89■□□□□ 0.93
Usp44Q8C2S0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp44Q8C2S0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp44Q8C2S0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Usp44Q8C2S0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp44Q8C2S0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp44Q8C2S0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.88■□□□□ 0.93
Usp44Q8C2S0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp44Q8C2S0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp44Q8C2S0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp44Q8C2S0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp44Q8C2S0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp44Q8C2S0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.88■□□□□ 0.93
Usp44Q8C2S0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp44Q8C2S0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.88■□□□□ 0.93
Usp44Q8C2S0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp44Q8C2S0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp44Q8C2S0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp44Q8C2S0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp44Q8C2S0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp44Q8C2S0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Usp44Q8C2S0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp44Q8C2S0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Usp44Q8C2S0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp44Q8C2S0 Mir8112-201ENSMUST00000184382 131 ntBASIC20.87■□□□□ 0.93
Usp44Q8C2S0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp44Q8C2S0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.87■□□□□ 0.93
Usp44Q8C2S0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp44Q8C2S0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp44Q8C2S0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Usp44Q8C2S0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.86■□□□□ 0.93
Usp44Q8C2S0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp44Q8C2S0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp44Q8C2S0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.86■□□□□ 0.93
Usp44Q8C2S0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Usp44Q8C2S0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Usp44Q8C2S0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp44Q8C2S0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp44Q8C2S0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp44Q8C2S0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp44Q8C2S0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp44Q8C2S0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Usp44Q8C2S0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp44Q8C2S0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.85■□□□□ 0.93
Usp44Q8C2S0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp44Q8C2S0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp44Q8C2S0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Usp44Q8C2S0 Gm13168-201ENSMUST00000121771 632 ntBASIC20.85■□□□□ 0.93
Usp44Q8C2S0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp44Q8C2S0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp44Q8C2S0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp44Q8C2S0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.85■□□□□ 0.93
Usp44Q8C2S0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.85■□□□□ 0.93
Usp44Q8C2S0 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.85■□□□□ 0.93
Usp44Q8C2S0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp44Q8C2S0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp44Q8C2S0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms