Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps9d1Q8C190 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.69■□□□□ 0.26
Vps9d1Q8C190 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps9d1Q8C190 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps9d1Q8C190 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps9d1Q8C190 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps9d1Q8C190 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps9d1Q8C190 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Vps9d1Q8C190 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps9d1Q8C190 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps9d1Q8C190 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps9d1Q8C190 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps9d1Q8C190 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Gm13146-201ENSMUST00000118508 780 ntBASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.68■□□□□ 0.26
Vps9d1Q8C190 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps9d1Q8C190 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps9d1Q8C190 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.67■□□□□ 0.26
Vps9d1Q8C190 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps9d1Q8C190 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Vps9d1Q8C190 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps9d1Q8C190 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
Vps9d1Q8C190 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps9d1Q8C190 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.67■□□□□ 0.26
Vps9d1Q8C190 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.67■□□□□ 0.26
Vps9d1Q8C190 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps9d1Q8C190 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Vps9d1Q8C190 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps9d1Q8C190 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps9d1Q8C190 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps9d1Q8C190 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps9d1Q8C190 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps9d1Q8C190 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.66■□□□□ 0.26
Vps9d1Q8C190 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.66■□□□□ 0.26
Vps9d1Q8C190 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps9d1Q8C190 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.66■□□□□ 0.26
Vps9d1Q8C190 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps9d1Q8C190 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps9d1Q8C190 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps9d1Q8C190 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps9d1Q8C190 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps9d1Q8C190 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps9d1Q8C190 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps9d1Q8C190 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Vps9d1Q8C190 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps9d1Q8C190 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps9d1Q8C190 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Vps9d1Q8C190 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Vps9d1Q8C190 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps9d1Q8C190 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vps9d1Q8C190 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps9d1Q8C190 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps9d1Q8C190 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps9d1Q8C190 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Vps9d1Q8C190 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.65■□□□□ 0.26
Vps9d1Q8C190 Gm13534-201ENSMUST00000121169 513 ntBASIC16.65■□□□□ 0.26
Vps9d1Q8C190 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.65■□□□□ 0.26
Vps9d1Q8C190 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vps9d1Q8C190 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps9d1Q8C190 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps9d1Q8C190 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps9d1Q8C190 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vps9d1Q8C190 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps9d1Q8C190 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Vps9d1Q8C190 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps9d1Q8C190 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps9d1Q8C190 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps9d1Q8C190 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps9d1Q8C190 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps9d1Q8C190 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Vps9d1Q8C190 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps9d1Q8C190 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps9d1Q8C190 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.64■□□□□ 0.25
Vps9d1Q8C190 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps9d1Q8C190 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps9d1Q8C190 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Vps9d1Q8C190 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps9d1Q8C190 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Vps9d1Q8C190 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.64■□□□□ 0.25
Vps9d1Q8C190 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps9d1Q8C190 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms