Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trerf1Q8BXJ2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trerf1Q8BXJ2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trerf1Q8BXJ2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trerf1Q8BXJ2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trerf1Q8BXJ2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trerf1Q8BXJ2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trerf1Q8BXJ2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trerf1Q8BXJ2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.73■□□□□ 0.59
Trerf1Q8BXJ2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trerf1Q8BXJ2 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.73■□□□□ 0.59
Trerf1Q8BXJ2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trerf1Q8BXJ2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trerf1Q8BXJ2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trerf1Q8BXJ2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trerf1Q8BXJ2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trerf1Q8BXJ2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trerf1Q8BXJ2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trerf1Q8BXJ2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trerf1Q8BXJ2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trerf1Q8BXJ2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trerf1Q8BXJ2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.72■□□□□ 0.59
Trerf1Q8BXJ2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Trerf1Q8BXJ2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.72■□□□□ 0.59
Trerf1Q8BXJ2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.72■□□□□ 0.59
Trerf1Q8BXJ2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trerf1Q8BXJ2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trerf1Q8BXJ2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trerf1Q8BXJ2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trerf1Q8BXJ2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trerf1Q8BXJ2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trerf1Q8BXJ2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trerf1Q8BXJ2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trerf1Q8BXJ2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trerf1Q8BXJ2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.71■□□□□ 0.59
Trerf1Q8BXJ2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Trerf1Q8BXJ2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.71■□□□□ 0.59
Trerf1Q8BXJ2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trerf1Q8BXJ2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trerf1Q8BXJ2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trerf1Q8BXJ2 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.71■□□□□ 0.59
Trerf1Q8BXJ2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trerf1Q8BXJ2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.71■□□□□ 0.59
Trerf1Q8BXJ2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.58
Trerf1Q8BXJ2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Trerf1Q8BXJ2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Trerf1Q8BXJ2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trerf1Q8BXJ2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.7■□□□□ 0.58
Trerf1Q8BXJ2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trerf1Q8BXJ2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trerf1Q8BXJ2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.7■□□□□ 0.58
Trerf1Q8BXJ2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Trerf1Q8BXJ2 Gm27011-201ENSMUST00000182352 972 ntBASIC18.7■□□□□ 0.58
Trerf1Q8BXJ2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trerf1Q8BXJ2 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.7■□□□□ 0.58
Trerf1Q8BXJ2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trerf1Q8BXJ2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trerf1Q8BXJ2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trerf1Q8BXJ2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trerf1Q8BXJ2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trerf1Q8BXJ2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trerf1Q8BXJ2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trerf1Q8BXJ2 Gm26524-201ENSMUST00000192339 390 ntBASIC18.69■□□□□ 0.58
Trerf1Q8BXJ2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Trerf1Q8BXJ2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trerf1Q8BXJ2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trerf1Q8BXJ2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trerf1Q8BXJ2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trerf1Q8BXJ2 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.69■□□□□ 0.58
Trerf1Q8BXJ2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trerf1Q8BXJ2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trerf1Q8BXJ2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Trerf1Q8BXJ2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trerf1Q8BXJ2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Trerf1Q8BXJ2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trerf1Q8BXJ2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trerf1Q8BXJ2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trerf1Q8BXJ2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trerf1Q8BXJ2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trerf1Q8BXJ2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trerf1Q8BXJ2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Trerf1Q8BXJ2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.68■□□□□ 0.58
Trerf1Q8BXJ2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trerf1Q8BXJ2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trerf1Q8BXJ2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trerf1Q8BXJ2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trerf1Q8BXJ2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trerf1Q8BXJ2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trerf1Q8BXJ2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trerf1Q8BXJ2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trerf1Q8BXJ2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trerf1Q8BXJ2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trerf1Q8BXJ2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Trerf1Q8BXJ2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trerf1Q8BXJ2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trerf1Q8BXJ2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trerf1Q8BXJ2 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.67■□□□□ 0.58
Trerf1Q8BXJ2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.67■□□□□ 0.58
Trerf1Q8BXJ2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trerf1Q8BXJ2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms