Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Gm13534-201ENSMUST00000121169 513 ntBASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Gm45417-201ENSMUST00000209533 758 ntBASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm11Q8BUV6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Idnk-204ENSMUST00000226010 1898 ntBASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Gm12821-201ENSMUST00000120022 600 ntBASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Reep4-203ENSMUST00000226563 1444 ntBASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm11Q8BUV6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Lsm11Q8BUV6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm11Q8BUV6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm11Q8BUV6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm11Q8BUV6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm11Q8BUV6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.15■□□□□ 0.02
Lsm11Q8BUV6 Gm43060-201ENSMUST00000200621 289 ntBASIC15.15■□□□□ 0.02
Lsm11Q8BUV6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.15■□□□□ 0.02
Lsm11Q8BUV6 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.15■□□□□ 0.02
Lsm11Q8BUV6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm11Q8BUV6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm11Q8BUV6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm11Q8BUV6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Lsm11Q8BUV6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm11Q8BUV6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm11Q8BUV6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm11Q8BUV6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.15■□□□□ 0.02
Lsm11Q8BUV6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.15■□□□□ 0.02
Lsm11Q8BUV6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm11Q8BUV6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm11Q8BUV6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm11Q8BUV6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.14■□□□□ 0.01
Lsm11Q8BUV6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm11Q8BUV6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm11Q8BUV6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.14■□□□□ 0.01
Lsm11Q8BUV6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm11Q8BUV6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm11Q8BUV6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm11Q8BUV6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm11Q8BUV6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm11Q8BUV6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm11Q8BUV6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.14■□□□□ 0.01
Lsm11Q8BUV6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm11Q8BUV6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms