Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.72□□□□□ -0.05
Smco3Q8BQM7 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Smco3Q8BQM7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smco3Q8BQM7 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Smco3Q8BQM7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Smco3Q8BQM7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smco3Q8BQM7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.71□□□□□ -0.05
Smco3Q8BQM7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Smco3Q8BQM7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smco3Q8BQM7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smco3Q8BQM7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smco3Q8BQM7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smco3Q8BQM7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smco3Q8BQM7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smco3Q8BQM7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smco3Q8BQM7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smco3Q8BQM7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smco3Q8BQM7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smco3Q8BQM7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.71□□□□□ -0.05
Smco3Q8BQM7 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.71□□□□□ -0.05
Smco3Q8BQM7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smco3Q8BQM7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smco3Q8BQM7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smco3Q8BQM7 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smco3Q8BQM7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smco3Q8BQM7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smco3Q8BQM7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smco3Q8BQM7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
Smco3Q8BQM7 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
Smco3Q8BQM7 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.71□□□□□ -0.06
Smco3Q8BQM7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smco3Q8BQM7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smco3Q8BQM7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smco3Q8BQM7 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Smco3Q8BQM7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smco3Q8BQM7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Smco3Q8BQM7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smco3Q8BQM7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.7□□□□□ -0.06
Smco3Q8BQM7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Smco3Q8BQM7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smco3Q8BQM7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Smco3Q8BQM7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smco3Q8BQM7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smco3Q8BQM7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.7□□□□□ -0.06
Smco3Q8BQM7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smco3Q8BQM7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smco3Q8BQM7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smco3Q8BQM7 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Smco3Q8BQM7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smco3Q8BQM7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Smco3Q8BQM7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smco3Q8BQM7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smco3Q8BQM7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smco3Q8BQM7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Smco3Q8BQM7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms