Protein–RNA interactions for Protein: Q8BP99

UPF0500 protein C1orf216 homolog, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8BP99 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Q8BP99 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8BP99 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8BP99 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8BP99 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8BP99 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Q8BP99 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Q8BP99 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8BP99 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.54■□□□□ 0.4
Q8BP99 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Q8BP99 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Q8BP99 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Q8BP99 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8BP99 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q8BP99 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Q8BP99 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.54■□□□□ 0.4
Q8BP99 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.53■□□□□ 0.4
Q8BP99 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Q8BP99 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Q8BP99 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Q8BP99 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Q8BP99 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8BP99 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Q8BP99 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Q8BP99 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8BP99 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Q8BP99 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8BP99 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8BP99 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8BP99 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8BP99 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8BP99 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8BP99 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Q8BP99 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8BP99 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.52■□□□□ 0.4
Q8BP99 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8BP99 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8BP99 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q8BP99 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Q8BP99 Tgds-204ENSMUST00000228543 1594 ntBASIC17.52■□□□□ 0.39
Q8BP99 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q8BP99 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q8BP99 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Q8BP99 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q8BP99 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.52■□□□□ 0.39
Q8BP99 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q8BP99 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
Q8BP99 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8BP99 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8BP99 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8BP99 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Q8BP99 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8BP99 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.51■□□□□ 0.39
Q8BP99 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8BP99 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Q8BP99 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Q8BP99 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8BP99 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Q8BP99 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8BP99 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8BP99 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Q8BP99 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8BP99 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Q8BP99 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Q8BP99 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Q8BP99 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Q8BP99 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.5■□□□□ 0.39
Q8BP99 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8BP99 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8BP99 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8BP99 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8BP99 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Q8BP99 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8BP99 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Q8BP99 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Q8BP99 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.5■□□□□ 0.39
Q8BP99 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8BP99 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8BP99 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8BP99 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Q8BP99 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Q8BP99 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8BP99 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Q8BP99 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8BP99 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8BP99 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Q8BP99 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Q8BP99 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.49■□□□□ 0.39
Q8BP99 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Q8BP99 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Q8BP99 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8BP99 Gm6211-202ENSMUST00000167849 925 ntBASIC17.49■□□□□ 0.39
Q8BP99 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8BP99 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.49■□□□□ 0.39
Q8BP99 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Q8BP99 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8BP99 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Q8BP99 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8BP99 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q8BP99 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms