Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col16a1Q8BLX7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Col16a1Q8BLX7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col16a1Q8BLX7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC23.53■■□□□ 1.36
Col16a1Q8BLX7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC23.52■■□□□ 1.36
Col16a1Q8BLX7 Gm27389-201ENSMUST00000183622 195 ntBASIC23.52■■□□□ 1.36
Col16a1Q8BLX7 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC23.52■■□□□ 1.36
Col16a1Q8BLX7 AC133598.3-202ENSMUST00000224219 531 ntBASIC23.52■■□□□ 1.36
Col16a1Q8BLX7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Col16a1Q8BLX7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col16a1Q8BLX7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col16a1Q8BLX7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col16a1Q8BLX7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC23.52■■□□□ 1.36
Col16a1Q8BLX7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col16a1Q8BLX7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Col16a1Q8BLX7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Col16a1Q8BLX7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Col16a1Q8BLX7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.51■■□□□ 1.35
Col16a1Q8BLX7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Col16a1Q8BLX7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col16a1Q8BLX7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC23.51■■□□□ 1.35
Col16a1Q8BLX7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col16a1Q8BLX7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col16a1Q8BLX7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col16a1Q8BLX7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC23.5■■□□□ 1.35
Col16a1Q8BLX7 Il3ra-202ENSMUST00000223589 738 ntBASIC23.5■■□□□ 1.35
Col16a1Q8BLX7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col16a1Q8BLX7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col16a1Q8BLX7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col16a1Q8BLX7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col16a1Q8BLX7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col16a1Q8BLX7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col16a1Q8BLX7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col16a1Q8BLX7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col16a1Q8BLX7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col16a1Q8BLX7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Col16a1Q8BLX7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Col16a1Q8BLX7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Col16a1Q8BLX7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Col16a1Q8BLX7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col16a1Q8BLX7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col16a1Q8BLX7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col16a1Q8BLX7 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col16a1Q8BLX7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col16a1Q8BLX7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Col16a1Q8BLX7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC23.48■■□□□ 1.35
Col16a1Q8BLX7 Gm44771-201ENSMUST00000206975 626 ntBASIC23.48■■□□□ 1.35
Col16a1Q8BLX7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Col16a1Q8BLX7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Col16a1Q8BLX7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Col16a1Q8BLX7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Col16a1Q8BLX7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Col16a1Q8BLX7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Col16a1Q8BLX7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC23.48■■□□□ 1.35
Col16a1Q8BLX7 Gm37025-201ENSMUST00000195159 829 ntBASIC23.48■■□□□ 1.35
Col16a1Q8BLX7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Col16a1Q8BLX7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col16a1Q8BLX7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col16a1Q8BLX7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col16a1Q8BLX7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col16a1Q8BLX7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col16a1Q8BLX7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col16a1Q8BLX7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col16a1Q8BLX7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col16a1Q8BLX7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col16a1Q8BLX7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col16a1Q8BLX7 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col16a1Q8BLX7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Col16a1Q8BLX7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
Col16a1Q8BLX7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Col16a1Q8BLX7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Col16a1Q8BLX7 Gm18958-201ENSMUST00000174258 762 ntBASIC23.46■■□□□ 1.35
Col16a1Q8BLX7 Gm7213-201ENSMUST00000215977 950 ntBASIC23.46■■□□□ 1.35
Col16a1Q8BLX7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col16a1Q8BLX7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col16a1Q8BLX7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col16a1Q8BLX7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Col16a1Q8BLX7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
Col16a1Q8BLX7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Col16a1Q8BLX7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Col16a1Q8BLX7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Col16a1Q8BLX7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Col16a1Q8BLX7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Col16a1Q8BLX7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Col16a1Q8BLX7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Col16a1Q8BLX7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Col16a1Q8BLX7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Col16a1Q8BLX7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Col16a1Q8BLX7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Col16a1Q8BLX7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC23.44■■□□□ 1.34
Col16a1Q8BLX7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Col16a1Q8BLX7 Gm11950-201ENSMUST00000121615 838 ntBASIC23.44■■□□□ 1.34
Col16a1Q8BLX7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC23.44■■□□□ 1.34
Col16a1Q8BLX7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC23.44■■□□□ 1.34
Col16a1Q8BLX7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
Col16a1Q8BLX7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Col16a1Q8BLX7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Col16a1Q8BLX7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Col16a1Q8BLX7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Col16a1Q8BLX7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms