Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdkl3Q8BLF2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdkl3Q8BLF2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Cdkl3Q8BLF2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.41■□□□□ 0.06
Cdkl3Q8BLF2 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.41■□□□□ 0.06
Cdkl3Q8BLF2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Cdkl3Q8BLF2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdkl3Q8BLF2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdkl3Q8BLF2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.41■□□□□ 0.06
Cdkl3Q8BLF2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Cdkl3Q8BLF2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdkl3Q8BLF2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdkl3Q8BLF2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdkl3Q8BLF2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdkl3Q8BLF2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdkl3Q8BLF2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Gm22238-201ENSMUST00000175222 88 ntBASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cdkl3Q8BLF2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.37■□□□□ 0.05
Cdkl3Q8BLF2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Cdkl3Q8BLF2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl3Q8BLF2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl3Q8BLF2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl3Q8BLF2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl3Q8BLF2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl3Q8BLF2 Rps24-207ENSMUST00000224568 714 ntBASIC15.37■□□□□ 0.05
Cdkl3Q8BLF2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl3Q8BLF2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl3Q8BLF2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl3Q8BLF2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.37■□□□□ 0.05
Cdkl3Q8BLF2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl3Q8BLF2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl3Q8BLF2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms