Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smg1Q8BKX6 Gm11950-201ENSMUST00000121615 838 ntBASIC15.14■□□□□ 0.01
Smg1Q8BKX6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smg1Q8BKX6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smg1Q8BKX6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smg1Q8BKX6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smg1Q8BKX6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smg1Q8BKX6 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smg1Q8BKX6 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.14■□□□□ 0.01
Smg1Q8BKX6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smg1Q8BKX6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smg1Q8BKX6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smg1Q8BKX6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smg1Q8BKX6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.13■□□□□ 0.01
Smg1Q8BKX6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.13■□□□□ 0.01
Smg1Q8BKX6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smg1Q8BKX6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.13■□□□□ 0.01
Smg1Q8BKX6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smg1Q8BKX6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smg1Q8BKX6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smg1Q8BKX6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.13■□□□□ 0.01
Smg1Q8BKX6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.13■□□□□ 0.01
Smg1Q8BKX6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smg1Q8BKX6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.13■□□□□ 0.01
Smg1Q8BKX6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smg1Q8BKX6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smg1Q8BKX6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smg1Q8BKX6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smg1Q8BKX6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smg1Q8BKX6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smg1Q8BKX6 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.12■□□□□ 0.01
Smg1Q8BKX6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smg1Q8BKX6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smg1Q8BKX6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Smg1Q8BKX6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.12■□□□□ 0.01
Smg1Q8BKX6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smg1Q8BKX6 Gm17808-201ENSMUST00000200859 894 ntBASIC15.12■□□□□ 0.01
Smg1Q8BKX6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smg1Q8BKX6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smg1Q8BKX6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smg1Q8BKX6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Smg1Q8BKX6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.12■□□□□ 0.01
Smg1Q8BKX6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smg1Q8BKX6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smg1Q8BKX6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Gm18206-201ENSMUST00000207027 926 ntBASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Gm15794-201ENSMUST00000120182 631 ntBASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Gm5864-201ENSMUST00000202263 970 ntBASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smg1Q8BKX6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smg1Q8BKX6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smg1Q8BKX6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smg1Q8BKX6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smg1Q8BKX6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smg1Q8BKX6 Gm18733-201ENSMUST00000173950 856 ntBASIC15.1■□□□□ 0.01
Smg1Q8BKX6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smg1Q8BKX6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smg1Q8BKX6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smg1Q8BKX6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.1■□□□□ 0.01
Smg1Q8BKX6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smg1Q8BKX6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.1■□□□□ 0.01
Smg1Q8BKX6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smg1Q8BKX6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smg1Q8BKX6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smg1Q8BKX6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smg1Q8BKX6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Smg1Q8BKX6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smg1Q8BKX6 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.09■□□□□ 0.01
Smg1Q8BKX6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smg1Q8BKX6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smg1Q8BKX6 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smg1Q8BKX6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Smg1Q8BKX6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Smg1Q8BKX6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Smg1Q8BKX6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smg1Q8BKX6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Smg1Q8BKX6 Gm16061-201ENSMUST00000122167 857 ntBASIC15.08■□□□□ 0.01
Smg1Q8BKX6 Gm38285-201ENSMUST00000192928 922 ntBASIC15.08■□□□□ 0.01
Smg1Q8BKX6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smg1Q8BKX6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smg1Q8BKX6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Smg1Q8BKX6 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Smg1Q8BKX6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms