Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim23Q8BGX0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim23Q8BGX0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Trim23Q8BGX0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim23Q8BGX0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim23Q8BGX0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim23Q8BGX0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim23Q8BGX0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim23Q8BGX0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim23Q8BGX0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim23Q8BGX0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim23Q8BGX0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim23Q8BGX0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim23Q8BGX0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim23Q8BGX0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim23Q8BGX0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim23Q8BGX0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim23Q8BGX0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trim23Q8BGX0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim23Q8BGX0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim23Q8BGX0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim23Q8BGX0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim23Q8BGX0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.14■□□□□ 0.33
Trim23Q8BGX0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim23Q8BGX0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Trim23Q8BGX0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.13■□□□□ 0.33
Trim23Q8BGX0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim23Q8BGX0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Trim23Q8BGX0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim23Q8BGX0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.12■□□□□ 0.33
Trim23Q8BGX0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Trim23Q8BGX0 Gm10418-201ENSMUST00000100943 576 ntBASIC17.12■□□□□ 0.33
Trim23Q8BGX0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim23Q8BGX0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim23Q8BGX0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trim23Q8BGX0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim23Q8BGX0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim23Q8BGX0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim23Q8BGX0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim23Q8BGX0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim23Q8BGX0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim23Q8BGX0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim23Q8BGX0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim23Q8BGX0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim23Q8BGX0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim23Q8BGX0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim23Q8BGX0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trim23Q8BGX0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim23Q8BGX0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms