Protein–RNA interactions for Protein: Q8BGR1

Pdzph1, MCG20355, mousemouse

Predictions only

Length 1,238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzph1Q8BGR1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Pdzph1Q8BGR1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pdzph1Q8BGR1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pdzph1Q8BGR1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pdzph1Q8BGR1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pdzph1Q8BGR1 Gm24589-201ENSMUST00000116692 94 ntBASIC21.37■■□□□ 1.01
Pdzph1Q8BGR1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pdzph1Q8BGR1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pdzph1Q8BGR1 Gm18115-201ENSMUST00000221209 621 ntBASIC21.37■■□□□ 1.01
Pdzph1Q8BGR1 Il3ra-202ENSMUST00000223589 738 ntBASIC21.37■■□□□ 1.01
Pdzph1Q8BGR1 Mzt1-203ENSMUST00000227948 952 ntBASIC21.37■■□□□ 1.01
Pdzph1Q8BGR1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pdzph1Q8BGR1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Pdzph1Q8BGR1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pdzph1Q8BGR1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pdzph1Q8BGR1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdzph1Q8BGR1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.36■■□□□ 1.01
Pdzph1Q8BGR1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdzph1Q8BGR1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdzph1Q8BGR1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC21.36■■□□□ 1.01
Pdzph1Q8BGR1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdzph1Q8BGR1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pdzph1Q8BGR1 Gm9731-201ENSMUST00000209480 747 ntBASIC21.36■■□□□ 1.01
Pdzph1Q8BGR1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Pdzph1Q8BGR1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdzph1Q8BGR1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdzph1Q8BGR1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pdzph1Q8BGR1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC21.35■■□□□ 1.01
Pdzph1Q8BGR1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pdzph1Q8BGR1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pdzph1Q8BGR1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pdzph1Q8BGR1 Gm10418-201ENSMUST00000100943 576 ntBASIC21.35■■□□□ 1.01
Pdzph1Q8BGR1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.35■■□□□ 1.01
Pdzph1Q8BGR1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pdzph1Q8BGR1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Pdzph1Q8BGR1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC21.35■■□□□ 1.01
Pdzph1Q8BGR1 Gm27742-201ENSMUST00000184667 60 ntBASIC21.35■■□□□ 1.01
Pdzph1Q8BGR1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pdzph1Q8BGR1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pdzph1Q8BGR1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Pdzph1Q8BGR1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Pdzph1Q8BGR1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdzph1Q8BGR1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdzph1Q8BGR1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC21.34■■□□□ 1.01
Pdzph1Q8BGR1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdzph1Q8BGR1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.34■■□□□ 1.01
Pdzph1Q8BGR1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pdzph1Q8BGR1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pdzph1Q8BGR1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC21.34■■□□□ 1.01
Pdzph1Q8BGR1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Pdzph1Q8BGR1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pdzph1Q8BGR1 Notumos-201ENSMUST00000151998 2659 ntBASIC21.34■■□□□ 1.01
Pdzph1Q8BGR1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pdzph1Q8BGR1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pdzph1Q8BGR1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pdzph1Q8BGR1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pdzph1Q8BGR1 Gm26039-201ENSMUST00000158152 144 ntBASIC21.33■■□□□ 1.01
Pdzph1Q8BGR1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pdzph1Q8BGR1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Pdzph1Q8BGR1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.33■■□□□ 1
Pdzph1Q8BGR1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pdzph1Q8BGR1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pdzph1Q8BGR1 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.32■■□□□ 1
Pdzph1Q8BGR1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC21.32■■□□□ 1
Pdzph1Q8BGR1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Pdzph1Q8BGR1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pdzph1Q8BGR1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pdzph1Q8BGR1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pdzph1Q8BGR1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Pdzph1Q8BGR1 Gm37025-201ENSMUST00000195159 829 ntBASIC21.31■■□□□ 1
Pdzph1Q8BGR1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.31■■□□□ 1
Pdzph1Q8BGR1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pdzph1Q8BGR1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pdzph1Q8BGR1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pdzph1Q8BGR1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pdzph1Q8BGR1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pdzph1Q8BGR1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pdzph1Q8BGR1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.3■■□□□ 1
Pdzph1Q8BGR1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Pdzph1Q8BGR1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pdzph1Q8BGR1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pdzph1Q8BGR1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pdzph1Q8BGR1 Gm6623-201ENSMUST00000173570 544 ntBASIC21.3■■□□□ 1
Pdzph1Q8BGR1 Gm3272-201ENSMUST00000181181 1229 ntBASIC21.3■■□□□ 1
Pdzph1Q8BGR1 Gm43514-201ENSMUST00000198852 424 ntBASIC21.3■■□□□ 1
Pdzph1Q8BGR1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.3■■□□□ 1
Pdzph1Q8BGR1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pdzph1Q8BGR1 Gm10566-201ENSMUST00000086739 996 ntBASIC21.3■■□□□ 1
Pdzph1Q8BGR1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pdzph1Q8BGR1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pdzph1Q8BGR1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pdzph1Q8BGR1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pdzph1Q8BGR1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pdzph1Q8BGR1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pdzph1Q8BGR1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC21.29■■□□□ 1
Pdzph1Q8BGR1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pdzph1Q8BGR1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC21.29■■□□□ 1
Pdzph1Q8BGR1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pdzph1Q8BGR1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pdzph1Q8BGR1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms