Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim6Q8BGE7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trim6Q8BGE7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim6Q8BGE7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim6Q8BGE7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Trim6Q8BGE7 Gm8969-201ENSMUST00000199694 526 ntBASIC18.94■□□□□ 0.62
Trim6Q8BGE7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim6Q8BGE7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim6Q8BGE7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim6Q8BGE7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trim6Q8BGE7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim6Q8BGE7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim6Q8BGE7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim6Q8BGE7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim6Q8BGE7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim6Q8BGE7 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.93■□□□□ 0.62
Trim6Q8BGE7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim6Q8BGE7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim6Q8BGE7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim6Q8BGE7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Gm13146-201ENSMUST00000118508 780 ntBASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Tgds-204ENSMUST00000228543 1594 ntBASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim6Q8BGE7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim6Q8BGE7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Trim6Q8BGE7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Trim6Q8BGE7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trim6Q8BGE7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim6Q8BGE7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim6Q8BGE7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Trim6Q8BGE7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim6Q8BGE7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.91■□□□□ 0.62
Trim6Q8BGE7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim6Q8BGE7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim6Q8BGE7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.91■□□□□ 0.62
Trim6Q8BGE7 Reep4-203ENSMUST00000226563 1444 ntBASIC18.91■□□□□ 0.62
Trim6Q8BGE7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim6Q8BGE7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.91■□□□□ 0.62
Trim6Q8BGE7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim6Q8BGE7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trim6Q8BGE7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim6Q8BGE7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim6Q8BGE7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim6Q8BGE7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim6Q8BGE7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim6Q8BGE7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim6Q8BGE7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim6Q8BGE7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.9■□□□□ 0.62
Trim6Q8BGE7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Trim6Q8BGE7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Trim6Q8BGE7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.9■□□□□ 0.62
Trim6Q8BGE7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim6Q8BGE7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Trim6Q8BGE7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim6Q8BGE7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim6Q8BGE7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim6Q8BGE7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim6Q8BGE7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim6Q8BGE7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Trim6Q8BGE7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim6Q8BGE7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim6Q8BGE7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim6Q8BGE7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim6Q8BGE7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.89■□□□□ 0.61
Trim6Q8BGE7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim6Q8BGE7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trim6Q8BGE7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim6Q8BGE7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Trim6Q8BGE7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim6Q8BGE7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.89■□□□□ 0.61
Trim6Q8BGE7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim6Q8BGE7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim6Q8BGE7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim6Q8BGE7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim6Q8BGE7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim6Q8BGE7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim6Q8BGE7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trim6Q8BGE7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim6Q8BGE7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim6Q8BGE7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms