Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubp1Q811S7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.55■□□□□ 0.4
Ubp1Q811S7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ubp1Q811S7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ubp1Q811S7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ubp1Q811S7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.55■□□□□ 0.4
Ubp1Q811S7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubp1Q811S7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Ubp1Q811S7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ubp1Q811S7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.55■□□□□ 0.4
Ubp1Q811S7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.55■□□□□ 0.4
Ubp1Q811S7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubp1Q811S7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ubp1Q811S7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubp1Q811S7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubp1Q811S7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubp1Q811S7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubp1Q811S7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubp1Q811S7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubp1Q811S7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubp1Q811S7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubp1Q811S7 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.54■□□□□ 0.4
Ubp1Q811S7 Gm20760-201ENSMUST00000179197 648 ntBASIC17.54■□□□□ 0.4
Ubp1Q811S7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.54■□□□□ 0.4
Ubp1Q811S7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.54■□□□□ 0.4
Ubp1Q811S7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubp1Q811S7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubp1Q811S7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubp1Q811S7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ubp1Q811S7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ubp1Q811S7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubp1Q811S7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ubp1Q811S7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubp1Q811S7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.53■□□□□ 0.4
Ubp1Q811S7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ubp1Q811S7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubp1Q811S7 Grk6-206ENSMUST00000224995 2971 ntBASIC17.53■□□□□ 0.4
Ubp1Q811S7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ubp1Q811S7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubp1Q811S7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ubp1Q811S7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubp1Q811S7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubp1Q811S7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
Ubp1Q811S7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ubp1Q811S7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubp1Q811S7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubp1Q811S7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubp1Q811S7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubp1Q811S7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubp1Q811S7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubp1Q811S7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubp1Q811S7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubp1Q811S7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ubp1Q811S7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.52■□□□□ 0.4
Ubp1Q811S7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.52■□□□□ 0.4
Ubp1Q811S7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubp1Q811S7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubp1Q811S7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Ubp1Q811S7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubp1Q811S7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Ubp1Q811S7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ubp1Q811S7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ubp1Q811S7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ubp1Q811S7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubp1Q811S7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubp1Q811S7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.51■□□□□ 0.39
Ubp1Q811S7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubp1Q811S7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubp1Q811S7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubp1Q811S7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ubp1Q811S7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.51■□□□□ 0.39
Ubp1Q811S7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubp1Q811S7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubp1Q811S7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubp1Q811S7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubp1Q811S7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubp1Q811S7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubp1Q811S7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ubp1Q811S7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubp1Q811S7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubp1Q811S7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubp1Q811S7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubp1Q811S7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Gm13158-201ENSMUST00000122007 736 ntBASIC17.5■□□□□ 0.39
Ubp1Q811S7 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.5■□□□□ 0.39
Ubp1Q811S7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ubp1Q811S7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms