Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk3bQ80YF6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk3bQ80YF6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk3bQ80YF6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk3bQ80YF6 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
Upk3bQ80YF6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk3bQ80YF6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk3bQ80YF6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Upk3bQ80YF6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.1■□□□□ 0.01
Upk3bQ80YF6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk3bQ80YF6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Upk3bQ80YF6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Upk3bQ80YF6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk3bQ80YF6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk3bQ80YF6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk3bQ80YF6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Upk3bQ80YF6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Upk3bQ80YF6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk3bQ80YF6 Reep4-203ENSMUST00000226563 1444 ntBASIC15.09■□□□□ 0.01
Upk3bQ80YF6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Upk3bQ80YF6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
Upk3bQ80YF6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.09■□□□□ 0.01
Upk3bQ80YF6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Upk3bQ80YF6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Upk3bQ80YF6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Upk3bQ80YF6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Upk3bQ80YF6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Upk3bQ80YF6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Upk3bQ80YF6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.09■□□□□ 0.01
Upk3bQ80YF6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Upk3bQ80YF6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.09■□□□□ 0.01
Upk3bQ80YF6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Upk3bQ80YF6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Upk3bQ80YF6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Upk3bQ80YF6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Upk3bQ80YF6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Upk3bQ80YF6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Upk3bQ80YF6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Upk3bQ80YF6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Upk3bQ80YF6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.08■□□□□ 0.01
Upk3bQ80YF6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Upk3bQ80YF6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Upk3bQ80YF6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Upk3bQ80YF6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.08■□□□□ 0
Upk3bQ80YF6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Upk3bQ80YF6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.08■□□□□ 0
Upk3bQ80YF6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Upk3bQ80YF6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Upk3bQ80YF6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.08■□□□□ 0
Upk3bQ80YF6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Upk3bQ80YF6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Upk3bQ80YF6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Upk3bQ80YF6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Upk3bQ80YF6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Upk3bQ80YF6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Upk3bQ80YF6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.08■□□□□ 0
Upk3bQ80YF6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Upk3bQ80YF6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Upk3bQ80YF6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Upk3bQ80YF6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Upk3bQ80YF6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Upk3bQ80YF6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Upk3bQ80YF6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Upk3bQ80YF6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Upk3bQ80YF6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Upk3bQ80YF6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Upk3bQ80YF6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Upk3bQ80YF6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.07■□□□□ 0
Upk3bQ80YF6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Upk3bQ80YF6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.07■□□□□ 0
Upk3bQ80YF6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Upk3bQ80YF6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Upk3bQ80YF6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Upk3bQ80YF6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Upk3bQ80YF6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Upk3bQ80YF6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Upk3bQ80YF6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.07■□□□□ 0
Upk3bQ80YF6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.07■□□□□ 0
Upk3bQ80YF6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.07■□□□□ 0
Upk3bQ80YF6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Upk3bQ80YF6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.07■□□□□ 0
Upk3bQ80YF6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Upk3bQ80YF6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Upk3bQ80YF6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Upk3bQ80YF6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Upk3bQ80YF6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Upk3bQ80YF6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.06■□□□□ 0
Upk3bQ80YF6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Upk3bQ80YF6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Upk3bQ80YF6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Upk3bQ80YF6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.06■□□□□ 0
Upk3bQ80YF6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.06■□□□□ 0
Upk3bQ80YF6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.06■□□□□ 0
Upk3bQ80YF6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Upk3bQ80YF6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Upk3bQ80YF6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Upk3bQ80YF6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Upk3bQ80YF6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Upk3bQ80YF6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Upk3bQ80YF6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms