Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrtm4Q80XG9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrtm4Q80XG9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.35■□□□□ 0.37
Lrrtm4Q80XG9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrrtm4Q80XG9 Fst-202ENSMUST00000223640 2612 ntBASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Gm10418-201ENSMUST00000100943 576 ntBASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Gm11643-201ENSMUST00000119578 864 ntBASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrrtm4Q80XG9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lrrtm4Q80XG9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Lrrtm4Q80XG9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lrrtm4Q80XG9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lrrtm4Q80XG9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lrrtm4Q80XG9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lrrtm4Q80XG9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lrrtm4Q80XG9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lrrtm4Q80XG9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Lrrtm4Q80XG9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lrrtm4Q80XG9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.33■□□□□ 0.36
Lrrtm4Q80XG9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Lrrtm4Q80XG9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lrrtm4Q80XG9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lrrtm4Q80XG9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Lrrtm4Q80XG9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lrrtm4Q80XG9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lrrtm4Q80XG9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrtm4Q80XG9 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.32■□□□□ 0.36
Lrrtm4Q80XG9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrtm4Q80XG9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrtm4Q80XG9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrtm4Q80XG9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.32■□□□□ 0.36
Lrrtm4Q80XG9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrtm4Q80XG9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Lrrtm4Q80XG9 Gm10252-201ENSMUST00000209541 832 ntBASIC17.32■□□□□ 0.36
Lrrtm4Q80XG9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Lrrtm4Q80XG9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrtm4Q80XG9 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.32■□□□□ 0.36
Lrrtm4Q80XG9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Lrrtm4Q80XG9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrtm4Q80XG9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Lrrtm4Q80XG9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrtm4Q80XG9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Lrrtm4Q80XG9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Lrrtm4Q80XG9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.31■□□□□ 0.36
Lrrtm4Q80XG9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.31■□□□□ 0.36
Lrrtm4Q80XG9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrtm4Q80XG9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.31■□□□□ 0.36
Lrrtm4Q80XG9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrtm4Q80XG9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrtm4Q80XG9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrtm4Q80XG9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrtm4Q80XG9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrtm4Q80XG9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrtm4Q80XG9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrtm4Q80XG9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm4Q80XG9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrtm4Q80XG9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.29■□□□□ 0.36
Lrrtm4Q80XG9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrtm4Q80XG9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrtm4Q80XG9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrtm4Q80XG9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms