Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38bQ80SY5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38bQ80SY5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 Gm11539-201ENSMUST00000119837 557 ntBASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 Gm13436-201ENSMUST00000120418 567 ntBASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 AA414768-201ENSMUST00000121924 1257 ntBASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 Gm7889-201ENSMUST00000185591 958 ntBASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38bQ80SY5 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38bQ80SY5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38bQ80SY5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.55■□□□□ 0.56
Prpf38bQ80SY5 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38bQ80SY5 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.55■□□□□ 0.56
Prpf38bQ80SY5 Gm6345-202ENSMUST00000180900 204 ntBASIC18.55■□□□□ 0.56
Prpf38bQ80SY5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38bQ80SY5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38bQ80SY5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38bQ80SY5 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.55■□□□□ 0.56
Prpf38bQ80SY5 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38bQ80SY5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38bQ80SY5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38bQ80SY5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.53■□□□□ 0.56
Prpf38bQ80SY5 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38bQ80SY5 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38bQ80SY5 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.53■□□□□ 0.56
Prpf38bQ80SY5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38bQ80SY5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38bQ80SY5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38bQ80SY5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38bQ80SY5 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Prpf38bQ80SY5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38bQ80SY5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38bQ80SY5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38bQ80SY5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf38bQ80SY5 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf38bQ80SY5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf38bQ80SY5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf38bQ80SY5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf38bQ80SY5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf38bQ80SY5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf38bQ80SY5 Gm10013-201ENSMUST00000106074 672 ntBASIC18.52■□□□□ 0.56
Prpf38bQ80SY5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Prpf38bQ80SY5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf38bQ80SY5 Gm14859-201ENSMUST00000117752 357 ntBASIC18.52■□□□□ 0.56
Prpf38bQ80SY5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf38bQ80SY5 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf38bQ80SY5 BC021767-201ENSMUST00000126387 1716 ntBASIC18.52■□□□□ 0.55
Prpf38bQ80SY5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Prpf38bQ80SY5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38bQ80SY5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38bQ80SY5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38bQ80SY5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38bQ80SY5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Prpf38bQ80SY5 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38bQ80SY5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38bQ80SY5 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38bQ80SY5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38bQ80SY5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38bQ80SY5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38bQ80SY5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.51■□□□□ 0.55
Prpf38bQ80SY5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf38bQ80SY5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
Prpf38bQ80SY5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms