Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.58■□□□□ 0.41
Pcdh8Q7TSK3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh8Q7TSK3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh8Q7TSK3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh8Q7TSK3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh8Q7TSK3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh8Q7TSK3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh8Q7TSK3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Pcdh8Q7TSK3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.58■□□□□ 0.4
Pcdh8Q7TSK3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Pcdh8Q7TSK3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdh8Q7TSK3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh8Q7TSK3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh8Q7TSK3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh8Q7TSK3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh8Q7TSK3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Gm15565-201ENSMUST00000118890 427 ntBASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Gm13836-201ENSMUST00000121159 501 ntBASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Gm42545-201ENSMUST00000202755 922 ntBASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh8Q7TSK3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh8Q7TSK3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh8Q7TSK3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdh8Q7TSK3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh8Q7TSK3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh8Q7TSK3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh8Q7TSK3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh8Q7TSK3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh8Q7TSK3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdh8Q7TSK3 Gm18025-201ENSMUST00000221733 862 ntBASIC17.56■□□□□ 0.4
Pcdh8Q7TSK3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh8Q7TSK3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh8Q7TSK3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdh8Q7TSK3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh8Q7TSK3 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.56■□□□□ 0.4
Pcdh8Q7TSK3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh8Q7TSK3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh8Q7TSK3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdh8Q7TSK3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh8Q7TSK3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.56■□□□□ 0.4
Pcdh8Q7TSK3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh8Q7TSK3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.55■□□□□ 0.4
Pcdh8Q7TSK3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh8Q7TSK3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.55■□□□□ 0.4
Pcdh8Q7TSK3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh8Q7TSK3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh8Q7TSK3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.55■□□□□ 0.4
Pcdh8Q7TSK3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdh8Q7TSK3 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.55■□□□□ 0.4
Pcdh8Q7TSK3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Pcdh8Q7TSK3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.55■□□□□ 0.4
Pcdh8Q7TSK3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh8Q7TSK3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh8Q7TSK3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh8Q7TSK3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh8Q7TSK3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdh8Q7TSK3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh8Q7TSK3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh8Q7TSK3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 Mir5122-201ENSMUST00000175004 89 ntBASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh8Q7TSK3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms