Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdp1Q7TSG2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdp1Q7TSG2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdp1Q7TSG2 Gm26571-201ENSMUST00000181399 666 ntBASIC19.44■□□□□ 0.7
Ctdp1Q7TSG2 Gm27405-201ENSMUST00000184201 112 ntBASIC19.44■□□□□ 0.7
Ctdp1Q7TSG2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdp1Q7TSG2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdp1Q7TSG2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.44■□□□□ 0.7
Ctdp1Q7TSG2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdp1Q7TSG2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctdp1Q7TSG2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Ctdp1Q7TSG2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.44■□□□□ 0.7
Ctdp1Q7TSG2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdp1Q7TSG2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ctdp1Q7TSG2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdp1Q7TSG2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdp1Q7TSG2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdp1Q7TSG2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdp1Q7TSG2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdp1Q7TSG2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdp1Q7TSG2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdp1Q7TSG2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.43■□□□□ 0.7
Ctdp1Q7TSG2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.43■□□□□ 0.7
Ctdp1Q7TSG2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdp1Q7TSG2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.43■□□□□ 0.7
Ctdp1Q7TSG2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdp1Q7TSG2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.43■□□□□ 0.7
Ctdp1Q7TSG2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Ctdp1Q7TSG2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ctdp1Q7TSG2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ctdp1Q7TSG2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctdp1Q7TSG2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.42■□□□□ 0.7
Ctdp1Q7TSG2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctdp1Q7TSG2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctdp1Q7TSG2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Ctdp1Q7TSG2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.42■□□□□ 0.7
Ctdp1Q7TSG2 Gm7291-201ENSMUST00000199147 382 ntBASIC19.42■□□□□ 0.7
Ctdp1Q7TSG2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.42■□□□□ 0.7
Ctdp1Q7TSG2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ctdp1Q7TSG2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ctdp1Q7TSG2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctdp1Q7TSG2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctdp1Q7TSG2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctdp1Q7TSG2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctdp1Q7TSG2 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.42■□□□□ 0.7
Ctdp1Q7TSG2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Ctdp1Q7TSG2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ctdp1Q7TSG2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ctdp1Q7TSG2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.41■□□□□ 0.7
Ctdp1Q7TSG2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctdp1Q7TSG2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctdp1Q7TSG2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ctdp1Q7TSG2 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.41■□□□□ 0.7
Ctdp1Q7TSG2 Reep4-203ENSMUST00000226563 1444 ntBASIC19.41■□□□□ 0.7
Ctdp1Q7TSG2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctdp1Q7TSG2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdp1Q7TSG2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdp1Q7TSG2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdp1Q7TSG2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdp1Q7TSG2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.4■□□□□ 0.7
Ctdp1Q7TSG2 Gm29257-201ENSMUST00000186115 639 ntBASIC19.4■□□□□ 0.7
Ctdp1Q7TSG2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.4■□□□□ 0.7
Ctdp1Q7TSG2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdp1Q7TSG2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ctdp1Q7TSG2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
Ctdp1Q7TSG2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdp1Q7TSG2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdp1Q7TSG2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdp1Q7TSG2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdp1Q7TSG2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdp1Q7TSG2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdp1Q7TSG2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdp1Q7TSG2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Ctdp1Q7TSG2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ctdp1Q7TSG2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ctdp1Q7TSG2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdp1Q7TSG2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms