Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx4Q7TNK1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx4Q7TNK1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rfx4Q7TNK1 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.13■□□□□ 0.33
Rfx4Q7TNK1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx4Q7TNK1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx4Q7TNK1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx4Q7TNK1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx4Q7TNK1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx4Q7TNK1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx4Q7TNK1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Rfx4Q7TNK1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx4Q7TNK1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx4Q7TNK1 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.12■□□□□ 0.33
Rfx4Q7TNK1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx4Q7TNK1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx4Q7TNK1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rfx4Q7TNK1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx4Q7TNK1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx4Q7TNK1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx4Q7TNK1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx4Q7TNK1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx4Q7TNK1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx4Q7TNK1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx4Q7TNK1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.11■□□□□ 0.33
Rfx4Q7TNK1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx4Q7TNK1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rfx4Q7TNK1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx4Q7TNK1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx4Q7TNK1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx4Q7TNK1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx4Q7TNK1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.11■□□□□ 0.33
Rfx4Q7TNK1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.11■□□□□ 0.33
Rfx4Q7TNK1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.11■□□□□ 0.33
Rfx4Q7TNK1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rfx4Q7TNK1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx4Q7TNK1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx4Q7TNK1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx4Q7TNK1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx4Q7TNK1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx4Q7TNK1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx4Q7TNK1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.1■□□□□ 0.33
Rfx4Q7TNK1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx4Q7TNK1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.1■□□□□ 0.33
Rfx4Q7TNK1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx4Q7TNK1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rfx4Q7TNK1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Rfx4Q7TNK1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx4Q7TNK1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.1■□□□□ 0.33
Rfx4Q7TNK1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx4Q7TNK1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx4Q7TNK1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx4Q7TNK1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx4Q7TNK1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx4Q7TNK1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx4Q7TNK1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx4Q7TNK1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx4Q7TNK1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx4Q7TNK1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx4Q7TNK1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx4Q7TNK1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx4Q7TNK1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.09■□□□□ 0.33
Rfx4Q7TNK1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx4Q7TNK1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx4Q7TNK1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx4Q7TNK1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx4Q7TNK1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx4Q7TNK1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx4Q7TNK1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rfx4Q7TNK1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Rfx4Q7TNK1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.08■□□□□ 0.33
Rfx4Q7TNK1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx4Q7TNK1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx4Q7TNK1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx4Q7TNK1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx4Q7TNK1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.08■□□□□ 0.33
Rfx4Q7TNK1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx4Q7TNK1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx4Q7TNK1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Rfx4Q7TNK1 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.08■□□□□ 0.32
Rfx4Q7TNK1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.08■□□□□ 0.32
Rfx4Q7TNK1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx4Q7TNK1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Rfx4Q7TNK1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx4Q7TNK1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx4Q7TNK1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx4Q7TNK1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx4Q7TNK1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx4Q7TNK1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx4Q7TNK1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx4Q7TNK1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
Rfx4Q7TNK1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms