Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.36■□□□□ 0.37
Scn4bQ7M729 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn4bQ7M729 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.35■□□□□ 0.37
Scn4bQ7M729 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Scn4bQ7M729 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn4bQ7M729 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn4bQ7M729 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Scn4bQ7M729 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn4bQ7M729 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.35■□□□□ 0.37
Scn4bQ7M729 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scn4bQ7M729 Gm38285-201ENSMUST00000192928 922 ntBASIC17.35■□□□□ 0.37
Scn4bQ7M729 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.35■□□□□ 0.37
Scn4bQ7M729 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.35■□□□□ 0.37
Scn4bQ7M729 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.35■□□□□ 0.37
Scn4bQ7M729 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn4bQ7M729 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn4bQ7M729 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Scn4bQ7M729 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Scn4bQ7M729 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn4bQ7M729 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scn4bQ7M729 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn4bQ7M729 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Scn4bQ7M729 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scn4bQ7M729 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scn4bQ7M729 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Scn4bQ7M729 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn4bQ7M729 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Scn4bQ7M729 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn4bQ7M729 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scn4bQ7M729 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.34■□□□□ 0.37
Scn4bQ7M729 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Scn4bQ7M729 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.34■□□□□ 0.37
Scn4bQ7M729 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Scn4bQ7M729 Gm29257-201ENSMUST00000186115 639 ntBASIC17.34■□□□□ 0.37
Scn4bQ7M729 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn4bQ7M729 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.34■□□□□ 0.37
Scn4bQ7M729 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn4bQ7M729 Flg-201ENSMUST00000050758 1488 ntBASIC17.34■□□□□ 0.37
Scn4bQ7M729 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scn4bQ7M729 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn4bQ7M729 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.34■□□□□ 0.37
Scn4bQ7M729 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn4bQ7M729 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn4bQ7M729 Zfp783-201ENSMUST00000095946 670 ntBASIC17.34■□□□□ 0.37
Scn4bQ7M729 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn4bQ7M729 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn4bQ7M729 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Scn4bQ7M729 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn4bQ7M729 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.33■□□□□ 0.36
Scn4bQ7M729 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.33■□□□□ 0.36
Scn4bQ7M729 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn4bQ7M729 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn4bQ7M729 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Scn4bQ7M729 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn4bQ7M729 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn4bQ7M729 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn4bQ7M729 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn4bQ7M729 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Scn4bQ7M729 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn4bQ7M729 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn4bQ7M729 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Scn4bQ7M729 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Scn4bQ7M729 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn4bQ7M729 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Scn4bQ7M729 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.32■□□□□ 0.36
Scn4bQ7M729 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.32■□□□□ 0.36
Scn4bQ7M729 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Scn4bQ7M729 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn4bQ7M729 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.32■□□□□ 0.36
Scn4bQ7M729 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn4bQ7M729 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn4bQ7M729 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn4bQ7M729 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Scn4bQ7M729 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.31■□□□□ 0.36
Scn4bQ7M729 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn4bQ7M729 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn4bQ7M729 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn4bQ7M729 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Scn4bQ7M729 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn4bQ7M729 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn4bQ7M729 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn4bQ7M729 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn4bQ7M729 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn4bQ7M729 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn4bQ7M729 Gm4968-201ENSMUST00000071458 858 ntBASIC17.31■□□□□ 0.36
Scn4bQ7M729 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn4bQ7M729 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn4bQ7M729 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn4bQ7M729 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn4bQ7M729 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn4bQ7M729 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn4bQ7M729 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn4bQ7M729 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn4bQ7M729 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Scn4bQ7M729 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.3■□□□□ 0.36
Scn4bQ7M729 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn4bQ7M729 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn4bQ7M729 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn4bQ7M729 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Scn4bQ7M729 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms